ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_42601_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 189..1916

Top 3 Functional Annotations

Value Algorithm Source
Probable thioredoxin n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A1T4_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 26.9
  • Coverage: 160.0
  • Bit_score: 62
  • Evalue 9.20e-07
redoxin domain protein similarity KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 123.0
  • Bit_score: 65
  • Evalue 4.00e-08
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:CDM64676.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 25.1
  • Coverage: 259.0
  • Bit_score: 65
  • Evalue 2.00e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1728
ATGAGATCGCTCTTCACTGCGATGTTCGTATCTTGCCTGGCCCTGGGAACGACAACGACCGGTGCTGGCCAAGAGGTTCGAGATGACTCGCCGCACCCGTCCGCTTTCCTGAATGACTACCCGTTCGCAACGACGAAGAACTGGCTGCCGCAGGTCCAATCCATTCTCCTCAAGTCCAACGTTCGGTATGAAAAAACGCCTTTGGGATTGAAGCGAGCTCGCCGTGAGATTCAGGCGCAATTTCCAGATCAAAAAGACCCTGATCCACTGAAATTCACCGCACTTCTGCCGATCGTCGACGTCGTCATTGAAGACATTTTCGATCACGCACGATTACGGACGTCGGCGTTACTCCAGACACCCGACAAGGTCAAACTTTCGAGAGACACTCGAATCTGGGACGGGCGAAGCACACTGATTCATGAGCAATCATTTCAATCCGGCCAGAATGGCTTTTTCCTCTCACCACATCCTGATCGAGTTGCCAGTTCCGCTCTTCAATACGTGAGCTACTTTCGACATCAACCTGCGGTCTATTGGTGGAATGGTGACCATAAATCGATCCAAGCCTTCGAGCAGCAATCCGGTCGACCTGCGGACTATATCTTGGTCGGCCGCGAGATGTTTCACGACGTGGAATGTGATGTTTATCTTCAGTCGATTGGAAACCAATCCGATCGATACTACATGGGCGTCCGCGATGGGCGATGGCAGGGAGCCAAAGTGGGGATTATGGCGTTCACGGATCCAGAACAAATGATGAAAACGTTCCAAGCAACCCTTGAAGAGTTCCTCGGCGAGAAAGTCTCTCCAGAGCGGATGGACGAAGTCACGACTTCTCTTCGGCGGTTACCCCAAGATCGCAAGGTGACTTGGTGCAAACGGCTTTACGAACGTCTGGGAAAACATTACCCACCCGTCTTCGAATACTGGTTCTCTGATTTTCGAGATCTGGGCAATGATCGTTGGATTCCGTTCCGAGAAGATTTCCTCTTCTTCCAGCATGAGAATCAGAAGTCGATTTTTCTCGAGACGAAACGCGTGACGACCATCACGGAAATTCAGTTGGATCAGCAAATTGATGACGAGCTCTTCAAAGTCGAATTGACCAATGGCGCGAGAGTGACTGACGAAAACTATCAACCACCATTGCACTACAAATTTAAGAAAGACATGTCCAACGACGAATGGCAGCAAATTGTCAAAGACGCCCAGAGGCGTGGTGAGCAGGCCAAGGTTCAACAAGAGAGAGTCGAAAAACTGCTGGGCCAGCCCGCACCGGCGTTGCCTTCGAGTGAATGGCTGAACTCCAAGCCGCTGACCTGGACGGACCTCGAAGGCCAGATTGTCATCCTCAAGTTCTGGTCAATCAGTTGTGGCCCCTGCTATGGAGAGATTTCGGCCTTGAAAACAGGCCTGACAGATGCGGGGGCGGACGTTCAGAACGCATCACCGCCGGTGGCCGTCATTGGAGTTCATTTGCCTTCTAAGGATCTCAGCGAGATTCAAAGCGTCTTAGACAAATATAAGCTCAAAGCCCCCATCTGCGTCGATCAGTTGACGAGCGATGAGCATCGGTGGGGCGAGTTCTTCGCCGCATGCGAAGTCGAGCAAATGCCGACATCGATTGCCGTCGATCAAACCGGTCGCATTCTGGCACACGGCAGCCTAAGCGACATCCTGACGGCGATCAGACTCCATCGCGAGAAGCTGGCGAACGCCAAATGA
PROTEIN sequence
Length: 576
MRSLFTAMFVSCLALGTTTTGAGQEVRDDSPHPSAFLNDYPFATTKNWLPQVQSILLKSNVRYEKTPLGLKRARREIQAQFPDQKDPDPLKFTALLPIVDVVIEDIFDHARLRTSALLQTPDKVKLSRDTRIWDGRSTLIHEQSFQSGQNGFFLSPHPDRVASSALQYVSYFRHQPAVYWWNGDHKSIQAFEQQSGRPADYILVGREMFHDVECDVYLQSIGNQSDRYYMGVRDGRWQGAKVGIMAFTDPEQMMKTFQATLEEFLGEKVSPERMDEVTTSLRRLPQDRKVTWCKRLYERLGKHYPPVFEYWFSDFRDLGNDRWIPFREDFLFFQHENQKSIFLETKRVTTITEIQLDQQIDDELFKVELTNGARVTDENYQPPLHYKFKKDMSNDEWQQIVKDAQRRGEQAKVQQERVEKLLGQPAPALPSSEWLNSKPLTWTDLEGQIVILKFWSISCGPCYGEISALKTGLTDAGADVQNASPPVAVIGVHLPSKDLSEIQSVLDKYKLKAPICVDQLTSDEHRWGEFFAACEVEQMPTSIAVDQTGRILAHGSLSDILTAIRLHREKLANAK*