ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_42601_5

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 8374..8829

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A6349 similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 151.0
  • Bit_score: 199
  • Evalue 1.30e-48
protein-export membrane protein SecD similarity KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 131.0
  • Bit_score: 56
  • Evalue 6.40e-06
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 28.2
  • Coverage: 124.0
  • Bit_score: 56
  • Evalue 3.20e-05

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGCGAACGTTTGTGATGACTGTGGCAACAATCATGCTTTTGCTAGGGTGCGATTCGAAGGTCGCCAAAGTCGTTCCACATCCTTTGGCGAAGACAGCGAAGTTTGAACTTTACGTCGTCTCACCAACCGAAGGAGCGAATACGAAAACAGAAACGGATCCCGAAACAGGTGCAACCATCTACCTCACGACCCCTGCCGTGATTACGACTGCGGATGTCATGTCGGTGTCGCTGGAAACGGAACCACAGGATCAAAAGCGACTCAACGTCAACCTGACCCCGGTTGGTTCGAAGAAGCTTTCCGCAGCAACGACACCGCCTAGTGGGATGAGGATCGCGATTGTCGCCAATGACAAGATTGTGAGCGCCCCCACGGTTCGCACGACGCTGTCCGACAGCGTCAGCATTTCTGGCAGCAAGTCGACAACGACGTATGATCAGCTGACTAAAGAGTAG
PROTEIN sequence
Length: 152
MRTFVMTVATIMLLLGCDSKVAKVVPHPLAKTAKFELYVVSPTEGANTKTETDPETGATIYLTTPAVITTADVMSVSLETEPQDQKRLNVNLTPVGSKKLSAATTPPSGMRIAIVANDKIVSAPTVRTTLSDSVSISGSKSTTTYDQLTKE*