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2019_SCN_bioreactor_t3_planktonic_scaffold_38515_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(2..1423)

Top 3 Functional Annotations

Value Algorithm Source
AMP-dependent synthetase and ligase n=1 Tax=Schlesneria paludicola RepID=UPI00029B37BD similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 474.0
  • Bit_score: 902
  • Evalue 9.50e-260
Long-chain fatty-acid-CoA ligase {ECO:0000313|EMBL:EMI43974.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 456.0
  • Bit_score: 439
  • Evalue 3.20e-120
long-chain-fatty-acid-CoA ligase similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 467.0
  • Bit_score: 373
  • Evalue 5.70e-101

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Taxonomy

Rhodopirellula sp. SWK7 → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1422
ATGTCCATTGCATTCAATGCGAAAGGTTTTACGGGTGAAAGCACGACGGCGGCTTGGCTGAGTCACTATCCAGCCTGCACGCCAACACATTTGGAATATCCAGAACGTCCAGTGTGGTCGCTGCTCGAGGAATCCGCCGAGAAGTTTCCTTTACGAGTTGCAATTCGTTACTTCAACGAATCGATCACCTACGAAGAGCTTTACACCAAGGCACGTCGAGCGGCAGCCTTATTCCAGTCCTTGGGCGTTAGACCCGGTGACCGCGTTGGTATCCTTCTTCCCAACGTTCCCGAATATCTCATCGCGGCATACGGCATTTGGATGGCAGGGGGACTCGTTGTTTCCCTCAGCCCTTTGGGCGCTGCGGTAGAACTGGATGATCTTCTCGAAGCGACCGATTGCAAATTGGTGGTCACGCTCGACTTGTTGGCTCACTTGGTCACCCAAGGGAAACACCGACCAGAACGACTGTTAACCTGCTCAATCGCCCCGCGTTTACCACGACTCCAGAAACTTCTTTACAAGCTCGCCTCATTGAAGGCGAATGGATTGAGCTACCGAATTCCGTCGAGTGAATTCCTGCATTCGGTCTCGCACACCGAGCCTATTGAAACTCCCTTGGAGCCGAGTTCACATGATCCCGCTTACATTCTGCCCACAGGCGGAACGACAGGTCGTGCCAAAGCGGTCACGTTGTCGCATGCCAATTTGATGGCAAACGCACTTCAGTTGAAAGCCTGGTGTGCCAATCGGACAGGGCGAGACACATTTCTCGCCGTAATTCCATTCTTTCACAGCTATGGGCTTTCGACATGCGTGACAAATGGGATCGCGATGGCCGCGACATTAGTGTTGCATCATCGATTTTACCCCGAAATAACTTTGGATTTGATTGAGTCGGCTCGTCCAACCGTTTTTCCAACCGTCCCTGCCATGCTGCATGTTATGAATCAGCATCTCAAGACGGCGAAACGTAAACGAGACCTCAGTTCGTTGATGTGGGTGATCTCAGGTGGTGCACCGCTCATGGAAGAAACGGCGGCCGAATTCGCGCAGCACACCGGCGCGAAGGTCGTCGAGGGATTCGGACTATCGGAATGCAGTCCAGTTACACATGCCGGGCCGCTAGACGGAACAGCTCGAATCGGCACGATTGGATTGCCACTTCCTGATACAGAATCATTGATCGTTGACGCCGAAACGGGCACCGACGTTCTACCGCCTGGTGAAGTCGGTGAGCTGATCGTTCGTGGTCCGCAAGTGATGTTGGGATACTGGAATAATCCAGCTGCCACGGAACAGATGTTGCGCGATGGGTGGCTCTATACGGGAGACTTGGCAACACAGGACGAAGACGGCTTTTTCAAGATTGTCGACCGCAAGAAAGATTTGATCATCACCAGCGGCTTCAACGTTTACCCC
PROTEIN sequence
Length: 474
MSIAFNAKGFTGESTTAAWLSHYPACTPTHLEYPERPVWSLLEESAEKFPLRVAIRYFNESITYEELYTKARRAAALFQSLGVRPGDRVGILLPNVPEYLIAAYGIWMAGGLVVSLSPLGAAVELDDLLEATDCKLVVTLDLLAHLVTQGKHRPERLLTCSIAPRLPRLQKLLYKLASLKANGLSYRIPSSEFLHSVSHTEPIETPLEPSSHDPAYILPTGGTTGRAKAVTLSHANLMANALQLKAWCANRTGRDTFLAVIPFFHSYGLSTCVTNGIAMAATLVLHHRFYPEITLDLIESARPTVFPTVPAMLHVMNQHLKTAKRKRDLSSLMWVISGGAPLMEETAAEFAQHTGAKVVEGFGLSECSPVTHAGPLDGTARIGTIGLPLPDTESLIVDAETGTDVLPPGEVGELIVRGPQVMLGYWNNPAATEQMLRDGWLYTGDLATQDEDGFFKIVDRKKDLIITSGFNVYP