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2019_SCN_bioreactor_t3_planktonic_scaffold_39546_7

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(5973..6455)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 161.0
  • Bit_score: 275
  • Evalue 4.60e-71
transcription termination factor Rho n=1 Tax=Schlesneria paludicola RepID=UPI00029AC3A0 similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 160.0
  • Bit_score: 307
  • Evalue 4.60e-81
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 161.0
  • Bit_score: 275
  • Evalue 9.30e-72

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 483
GTGTTTGTGTTGCTGGACAGTATTACACGTACCGCACGTGCGTTTAACAAATGGACCAATACGGGCCGAACCGGCACAGGTGGTCTCGACGTGAAGGCGATGGACATTCCGAAGAAGATGTTCGGTATGGCACGGCAGTTCGATGAGGGCGGCTCGCTGACAGTTGTCGGAACCGCGTTGGTCGAAACCGGTAGCCGCATGGACGAAGCGATCTTCCTGGAGTTCAAAGGTACCGGCAACATGGAAATGGTGCTGAGCCGCGACCTGGCAGAACGTCGTATTTGGCCAGCGATCGATATTTCTCGGTCGGGAACGCGTCGGGAAGAGAAAATTCTGTCTCCAGAAGTTCTCGAAGGCGTGACATTGCTGCGTCGCAGCCTGATCTCGCTAAGCCCTGTCGAAGCGATGGAACAGCTGACTCGGATTTTGCAAAAGTATCCGACGAATGCCGATTTCCTCGCGAAAGTTCGTTCGATCCTTTAA
PROTEIN sequence
Length: 161
VFVLLDSITRTARAFNKWTNTGRTGTGGLDVKAMDIPKKMFGMARQFDEGGSLTVVGTALVETGSRMDEAIFLEFKGTGNMEMVLSRDLAERRIWPAIDISRSGTRREEKILSPEVLEGVTLLRRSLISLSPVEAMEQLTRILQKYPTNADFLAKVRSIL*