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2019_SCN_bioreactor_t3_planktonic_scaffold_39955_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(2846..3403)

Top 3 Functional Annotations

Value Algorithm Source
ribosome recycling factor n=1 Tax=Schlesneria paludicola RepID=UPI00029AE39A similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 185.0
  • Bit_score: 358
  • Evalue 3.40e-96
ribosome recycling factor similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 185.0
  • Bit_score: 294
  • Evalue 1.30e-77
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 185.0
  • Bit_score: 294
  • Evalue 6.50e-77

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 558
ATGGATCAGGACGAAATTCTGTTGGACGCCGAAGAACGCATGGAAAAAGCGGCGTCCGTGGCCCATGACCATTTCCAGGGCCTGCGCACTGGCCGTGCTTCGACGGGCCTTGTTGATTCCGTTCGTGTGGACTACTACGGCAGCCCGACTCCCCTAAAGCAGATTGCGACGATCAGCGTTCCTGAAGCGCAGCAGATCATGATTCGTCCCTTTGACCAGGGAGTGATCAACGAGATTGCCAAGGCGATTCAGTCGAGCGACATCGGGCTGGCACCGAACTCGGACGGTCGAGTGATTCGCTTGAATGTGCCGCCATTGTCGACCGAACGTCGCAAGCAAATGGTTGGCCGGCTGAAGGATCTGGCGGAAGAGGCGCGCGTGGCAATTCGAAATATTCGTCGTGACGCAAACAAACACGCCGATACGGCTTTGAAAGACAAGCTCATGAACGAAGATATTCATGAGCAGACGAAAGAACAGATTCAGGAGCTGACCAAACAGTACGAAGGCAAAGTCAACTCGATGGCCGATGCCAAAGAGAAAGACATCATGAGCTAG
PROTEIN sequence
Length: 186
MDQDEILLDAEERMEKAASVAHDHFQGLRTGRASTGLVDSVRVDYYGSPTPLKQIATISVPEAQQIMIRPFDQGVINEIAKAIQSSDIGLAPNSDGRVIRLNVPPLSTERRKQMVGRLKDLAEEARVAIRNIRRDANKHADTALKDKLMNEDIHEQTKEQIQELTKQYEGKVNSMADAKEKDIMS*