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2019_SCN_bioreactor_t3_planktonic_scaffold_40603_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(5766..6203)

Top 3 Functional Annotations

Value Algorithm Source
translation initiation factor IF-3 n=1 Tax=Schlesneria paludicola RepID=UPI00029B03C9 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 145.0
  • Bit_score: 290
  • Evalue 5.20e-76
translation initiation factor IF-3 similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 145.0
  • Bit_score: 237
  • Evalue 1.50e-60
Translation initiation factor IF-3 {ECO:0000256|RuleBase:RU000646}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 145.0
  • Bit_score: 237
  • Evalue 7.40e-60

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 438
ATGCTGGGAGTTATCCCCACGTCAGAAGCGATGAGGGTCGCGACAGATGCCGGTCTTGATTTGGTGGAAGTCGCCCCGAATGAACGCCCGCCCGTTTGTCGAATCATGGACTACGGCAAGTTCAAATACGAGCAAAAGCGTAAGGCTGCGAACTCGGCAAAGCAGCATCAGGTGCAGCTCAAGGAAATCCGCCTCCGCCCGAAAACGGGTGAGCACGACATTGACTTCAAAGTGAAGCAGGCCCGGGATTTTCTCGCTCACAAAGACAAAGTGAAATTCAACGTCCAATTCAAGGGACGTGAAAACGCTCACCATGATCGCGGCCGCGAGATGCTCGCTAGCATCATTGAGCAACTGCAAGATATCAGCAAAGTGGAAAAGACGCCGTCGATGGAAGGTGGCCGCAATATGACGGCCGTGCTGTCGCCCAAAGCATGA
PROTEIN sequence
Length: 146
MLGVIPTSEAMRVATDAGLDLVEVAPNERPPVCRIMDYGKFKYEQKRKAANSAKQHQVQLKEIRLRPKTGEHDIDFKVKQARDFLAHKDKVKFNVQFKGRENAHHDRGREMLASIIEQLQDISKVEKTPSMEGGRNMTAVLSPKA*