ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_47440_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(408..1217)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00035E1035 similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 264.0
  • Bit_score: 169
  • Evalue 2.50e-39
Putative regulatory subunit {ECO:0000313|EMBL:AAX07510.1}; Flags: Fragment;; TaxID=235140 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gemmata.;" source="Gemmata sp. Wa1-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 217.0
  • Bit_score: 161
  • Evalue 1.60e-36
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 228.0
  • Bit_score: 124
  • Evalue 4.40e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmata sp. Wa1-1 → Gemmata → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 810
GGCGTCTCTCTTACGGATCAAGGCAGTGGAACGTTTCGGCGAATGAAGTCACTCAAAACTCTACACATTGATCGAGATCGAGGCGTCGACGATGCAATCTTCGACGAAATTGGCGATATGACGTGTTTGACGTCACTTTCCCTTGAAAGTGCTCAGATTACTGATGCGGGCATGGAGCGACTACCAAGACTCAGTAATCTAACCGAATTGAAACTCAGTGGAACAGCAATTACGGACCGTGGCCTAGGCAATATTTGTTTGCTGACTGAATTGAGGTCGCTGTATCTGCAGCAAACTCGTGTCACAGATTCCGGATTCGGAAACGTCGCGAACCTGAGAAACCTGTCAACTTTGGATCTCGGATTTACAAACGTCTCTGACACGGCCTTGGAGTCAATCGGGCAACTCAGCCAACTCAGGTCATTGCAACTTTGGAGCACGAAAATGACCGATACAGGAATGCGAAAGTTGTACGGGCTCAGGAGTTTAACGGATCTCGCAGTAGGAACTCGAGTGACCGACGAGGGATTAAGTCGCATCGGAGAATTTAAATGCCTCAAATCTTTAAACTTGCAAGGTACGCACATTACCAATCAAGGTCTAAAGTCGCTGCTCGATCTCGTGGAACTCGAGGCACTTACCCTGACAGGAACTCAGATTTCTGACGAAGGGGTTCAAGAACTCATCGGATTATCCAATCTGCGACATCTCCATGTGGCGCAGACGAAGATCTCTGAGACGGGACTCGCTGAACTGAAGAGTGGACTGAAGCGGCTGCAGGTGCTTTCAGGTCTGAGAGTGCATCGCTGA
PROTEIN sequence
Length: 270
GVSLTDQGSGTFRRMKSLKTLHIDRDRGVDDAIFDEIGDMTCLTSLSLESAQITDAGMERLPRLSNLTELKLSGTAITDRGLGNICLLTELRSLYLQQTRVTDSGFGNVANLRNLSTLDLGFTNVSDTALESIGQLSQLRSLQLWSTKMTDTGMRKLYGLRSLTDLAVGTRVTDEGLSRIGEFKCLKSLNLQGTHITNQGLKSLLDLVELEALTLTGTQISDEGVQELIGLSNLRHLHVAQTKISETGLAELKSGLKRLQVLSGLRVHR*