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2019_SCN_bioreactor_t3_planktonic_scaffold_47847_8

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 8096..9601

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029A74FE similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 502.0
  • Bit_score: 953
  • Evalue 5.00e-275
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 482.0
  • Bit_score: 572
  • Evalue 8.80e-161
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:ADG69052.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 482.0
  • Bit_score: 572
  • Evalue 4.40e-160

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1506
GTGACCGGCAAATGGATTGCTTGGCAGCAGGTAACATCTCAGATTCAAGCGGATGATGGTGTCCGCGTCCTGCAGGCTGTCGAGCAATTGGTCGATGTGGCCGTGTCCGCCAATTCCGATCTGGATTTTCTGCGCGCTCAACTTCACGAACTCGCAGGAGAACTGGCCGCACATTCCGTCGGCGTCTATTTGAGAACGCCAGAATGGGTTGCGCTGGCCCAGCATGGCCGACTCGGCTTGAACGAGATGCCCAAAAGCCTGCTGATGGATGTCCTCGACCGCGACTCGGGTTTCGTGGGATCGATGGATTCCGTCCCAGGGACATTTATCGTCGCCACCCCGCTACACAGCCGCGCTCATACCGGCTCGGTGCTTGTGTTTGCAGGACGCAGCTTCCCAGACGACGCATTACCGTCTGCGATGCTGATGTCGAAAGCAATCGGTGCCTGCCTCGATTTCCTGGCAGCGCGAAGCAAGTCGACTCGCCGGATCGAACAACTGCAAAGCATTCTTAAGATTTCATTGAACCTCTCGGCAGTTCATGAAACCGAGCCGCTGCTTGAACTGATTGCTCGCGAGGCAACTCGATTACTCGACTGCGATCGTGCCAGCATTTTCATCTGGGATAAGGATCATCACGAAGTCGTCGCCTGCCCCGCATTGGGTGTCGAAGGGAATTCGCTACGACTTCCGGACAGTACTGGCATCGTCGGCGAGGTGATCCACACCGGAAAAACACTGCGCGTTGACGACGCTTACCATGATTCCCGTTTCAGTCGCAAAGTCGACATGGCGAGTGGTTATAAGACTCGCAATCTTTTATGCGGCCCGCTTCATGGTTCGGACAAGAAACTGCTCGGAGCATTCGAAGTCATCAACAAGAATTCAGGCTCTTTCAGCCTCGACGACGAACAAACGCTCGCAGACTTGTCATTGCAGGTTGCCGTTGCCTTACAGAACACACGAGAACGTGAAGTTCTTCTGCGCTCGCATCGCCAGTTGACCGAACAGGTCACAAGAGGTGTCACCATCATTGGCGACAGTTCAGCGATGCAGGCCATGCGAAGTACGATTCGCCGATTGGCGGCGACCGATCTTCCAGTTTTGATTTTGGGTGAAAGCGGTACTGGCAAAGAAGTCGTCGCGCAGTCTCTACACTATCAAGGTCCACGAGCCAACCGCCCATTCATTGCCGTGAACTGTGCGGCCCTCACCGAAACTTTGCTGGAAAGTGAACTATTCGGCCACGAGAAAGGCGCCTTCACCGACGCACGTGAAATGCATCGCGGAAAGTTTGAAGTCGCAGAAGGCGGCACGATCTTTCTGGATGAAATCGGCGATATGAGTCCCGGCGGTCAGGCCAAGCTGCTGCGTGTTCTTGAGCAGAAAGTAATTACTCGCGTCGGGGGATCACAGTCCATTCCCATCAATGCGCGCGTCATCGCGGCAACGAACGCTCATTTGGCAGACGCAGTGCGAGCCAAAAAATTCCGCGAGGATCTCTAT
PROTEIN sequence
Length: 502
VTGKWIAWQQVTSQIQADDGVRVLQAVEQLVDVAVSANSDLDFLRAQLHELAGELAAHSVGVYLRTPEWVALAQHGRLGLNEMPKSLLMDVLDRDSGFVGSMDSVPGTFIVATPLHSRAHTGSVLVFAGRSFPDDALPSAMLMSKAIGACLDFLAARSKSTRRIEQLQSILKISLNLSAVHETEPLLELIAREATRLLDCDRASIFIWDKDHHEVVACPALGVEGNSLRLPDSTGIVGEVIHTGKTLRVDDAYHDSRFSRKVDMASGYKTRNLLCGPLHGSDKKLLGAFEVINKNSGSFSLDDEQTLADLSLQVAVALQNTREREVLLRSHRQLTEQVTRGVTIIGDSSAMQAMRSTIRRLAATDLPVLILGESGTGKEVVAQSLHYQGPRANRPFIAVNCAALTETLLESELFGHEKGAFTDAREMHRGKFEVAEGGTIFLDEIGDMSPGGQAKLLRVLEQKVITRVGGSQSIPINARVIAATNAHLADAVRAKKFREDLY