ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_52859_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 233..1429

Top 3 Functional Annotations

Value Algorithm Source
elongation factor Tu n=1 Tax=Schlesneria paludicola RepID=UPI00029AEFBD similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 398.0
  • Bit_score: 782
  • Evalue 1.60e-223
translation elongation factor Tu similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 397.0
  • Bit_score: 711
  • Evalue 9.60e-203
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 397.0
  • Bit_score: 711
  • Evalue 4.80e-202

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1197
ATGGCGAAGGAAACATTTCAACGCACAAAGCCACACGTGAACGTAGGCACGATTGGCCACATCGATCACGGCAAGACAACCACCACAGCTGCAATCCTGGCTGTGCAGACCGCTAAGGGTTTGGCAAAGTTCAAAACCTATGCGGATATCGCCAAGGGCGGTACGGTTCGTGACGACACGAAGACCGTTACGATCGCCGTGAGCCACGTTGAATACGAAACCCCAAATCGTCACTACGCTCACATCGATTGCCCTGGTCACGCTGACTATATTAAGAACATGATCACCGGTGCCGCTCAGATGGACGGCGCGATCCTGGTTGTGTCGGCCGCTGACGGTCCGATGCCACAGACTCGCGAGCACATCCTGTTGGCTAAGCAGGTGAACGTTCCTGCTCTGGTTGTGTTCCTCAACAAGTGTGACCTCGTCGACGACGAAGAGTTGCTCGAGTTGGTTGAGATGGAAGTTCGCGACTTGTTGAACAAGTACGAATTTCCCGGCGACGACATTACGATCGTTCGCGGCAACGCCAAGGGTGCGTTGGATAATCCAGCCGATCCAAAGTTCAGTGATTGCATCACGAAGTTGATGGAAGCGTTGGATAAGGATATTCCTGAGCCAACACGCGACACCGACAAGCCAATGTTGATGGCAATCGAAGACGTGTTCTCGATCGAAGGTCGTGGTACCGTGGTGACCGGCCGTATCGAGCAAGGTGTGCTCAAGGTTGGTGATAAGGTCACGCTGCTCGGTCTCGCCGATCCTCAGGAAACGGTTTGCACCGGTGTTGAAATGTTCCAGAAGACCTTGGATCAAGGTCAAGCTGGCGATAACGTCGGGGTGCTGCTCCGCGGTATCCGCAAGGAAGACGTTCAACGCGGTCAGGTTCTGGCTAAGCCCGGATCGATCAAGCCACACTCGAAATTCGAAGCTCAGGTTTACGTGTTGAGCAAGGAAGAAGGCGGTCGCCACACCCCATTCTTCAGCGGATATCGCCCTCAGTTCTACTTCCGCACGACCGACGTGACGGGTGCAGCTGATCTCTTGGGTGGCGCAGAAATGTGTATGCCCGGCGACAATGTCAAGTTGTGTGTGACTCTTGGTAAGCCAATCGCTATGACGGAGAACGTTCGCTTCGCTATCCGCGAAGGGGGCAAGACCGTTGGTTCGGGCGTTGTGACCAAGATTCTCGAGTAG
PROTEIN sequence
Length: 399
MAKETFQRTKPHVNVGTIGHIDHGKTTTTAAILAVQTAKGLAKFKTYADIAKGGTVRDDTKTVTIAVSHVEYETPNRHYAHIDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVNVPALVVFLNKCDLVDDEELLELVEMEVRDLLNKYEFPGDDITIVRGNAKGALDNPADPKFSDCITKLMEALDKDIPEPTRDTDKPMLMAIEDVFSIEGRGTVVTGRIEQGVLKVGDKVTLLGLADPQETVCTGVEMFQKTLDQGQAGDNVGVLLRGIRKEDVQRGQVLAKPGSIKPHSKFEAQVYVLSKEEGGRHTPFFSGYRPQFYFRTTDVTGAADLLGGAEMCMPGDNVKLCVTLGKPIAMTENVRFAIREGGKTVGSGVVTKILE*