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2019_SCN_bioreactor_t3_planktonic_scaffold_52859_10

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 9399..13580

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 1417.0
  • Bit_score: 2149
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 1417.0
  • Bit_score: 2149
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SII1_PLABD similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 1417.0
  • Bit_score: 2149
  • Evalue 0.0

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Taxonomy

Rubinisphaera brasiliensis → Rubinisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 4182
GTGAGCGTCGGTGAAACCACATACGATCGCGTCAACGAGTATTCAGCAATCAAGATTGGTTTGGCCAGTCCGCAAGACATCCGCGGGTGGTCATTTGGCGAAGTCAAGAAGCCAGAAACCATCAACTATCGAACCTATCGCCCTGAGCGTGACGGTTTGTTCTGCGAGCGCATCTTTGGACCTGAGAAGGACTGGGAATGCGCCTGTGGTAAGTATCGTGGGATGAAGTACAAAGGGATGATTTGCGATCGCTGCGGCGTCAAGGTCACCCATAGCCGCGTGCGCCGAAAGCGCATGGGGCATATCGAACTGGCCGCGCCCGTCGTTCATATCTGGTTCTTCAAGTCGATGCCCAGCCGCCTGGGTGCGTTGCTGAACGTTAAGACGACCGCGTTGGAAAAAGTTGTCTACTTCCAGGACTACATTGTTCTCGATCCCGGCGATACTCCGCTGCGGAAGGGGCAATTGCTGACAGAAGAAGAAGCTCGTCAAGCGCGCGCCAAGTACGGCGAAGGCACCTTCGAAATCGAAATGGGTGCTGATGCTGTCAAGAAGTTGCTGACAGGGCTGAATCTGCGTGAGTTGTCAGAGCAGCTGCGCGTCGAATTGAAGAAGACGTCCAGTCAGCAGAAGAAGAAAGAGCTGATCAAACGGCTGAAGATCGCGGAAGCCTTGCGCGACAGCGATAACAAGCCCGAATGGATGGTGCTGGACTGCGTGCCAGTAATTCCACCAGATCTTCGCCCATTGGTTCTGCTCGATTCGGGCAACTTCGCCACAAGCGATTTGAACGACCTCTACCGCCGAATCATCAATCGAAACAATCGCTTGAAGAAGCTGGTGGATCTGAACGCCCCTGAAGTCATCGTACGCAATGAAAAGCGTATGTTGCAGCAGTCGGTCGATGCGTTGTTCGACAACAACCGCTGCAAGCGACCGGTGCTGGGTTCGTCGAACCGACCTTTGAAGTCCTTGACCGACATGATCAAGGGTAAGCAGGGGCGATTCCGCGAAAACTTGCTGGGTAAACGCGTCGACTATTCCGCACGAAGCGTGATCGTCGTCGGTCCGAATCTCGAACTGCATCAGTGCGGTCTTCCCAAGAAGATTGCACTCGAACTGTACCAGCCGTTCATCATTCGTCGGCTCAAGGAACTCGGTCACGCCGATACCATCAAGAGCGCGAAGCGCATGCTGGAACGACGCGACGAAGAGGTGTGGGATATTCTCGAAGAAGTCATCACCAATCATCCGGTGTTGCTGAACCGAGCCCCTACGCTGCACCGAATGGGTATTCAGGCCTTCGAACCAATTCTGGTTGAAGGTAACGCGATTCGAATTCACCCACTGGTCTGTAAGGGCTTCAACGCTGACTTTGACGGCGATCAGATGGCTGTGCACTTGCCGCTGTCGATCGAGGCTCAAGTCGAAGCCACGACGCTGATGATGTCGACGAACAACATCTTCAGTCCGTCGAACGGTGCTCCGATTATCAGTCCGTCGCAAGACATCGTGATGGGTTGCTACTACGTCACGTTGAAGAAGGCCGAGCGGCCCGGCGATGGCATGATCTTTGCCTCGACTCAAGAAGTGCACACTGCATTCTTGTTGGGCAAGGTCACGTTGCACACGGCAATCAAGGTGCGGATGCCAAAGGACAAACGCGTCAAGGGCGAAGGTTCAGACGATTACAGCCTGGGCGGCGTCGTCGAAACCAGCGTCGGCCGCATTATGTTCAACGACATTCTGCCGCCGAAGATGGCGTTCTATAACCAGACGATGAAGAACAAGGATTTGGCGAACGTCATTTCCGACTGCTATCTGGAACTGGGACGACGTCAGACGATCAAGTTGCTGGACCGGATGAAGGAAGTTGGCTTCCGCGAATCGACCCGTAGCGGTCTGTCGTTCGCCGCCAGCGATCTGAAGACGCCGGACAACAAGGAAAAGGTGATTCTGGCTGCCGAAGCCACCGTTCTCAAGAAGCAGAAGCTTTATGAGAAGGGTGTGATCACGGCGAAGGAACGTTACGAGCAGGTTTTGGATACTTGGACGCACGCTAGCGATCAGATCAAGATCGCGATGATGGAAGCGTTCAAGAACGACCATCGTGATAACGGCCACTATGTGAACCCTGTGTACCTGATGGCCGACTCGGGTGCTCGAGGGGGCCAGGAACAGATTCGACAGCTCGCTGGTATGCGTGGTTTGATGGCCAAGCCAAGCGGCGAAATCATCGAAACGCCGATTAAGGCGAACTTCCGTGAAGGTCTGTCGGTGCTGGAATACTTCAGCTCGACACACGGTGCCCGAAAGGGTTTGGCCGATACCGCGTTGAAGACGGCAGACAGCGGTTACTTGACCCGTAAGCTGGCCGATATTTGCCAGAATATGGTCGTGACGACGCATGACTGCGGAACCACCAAGGGGATTACCCGCGGTGTCGTCTATCGTGGTGAAAAGGTCGAAGTCAGTCTGGCCGACGCGATTCGTGGTCGTGTGAGCCGGCAGAACATTGTGAATCGTAGCCCGATGACTTGCGAGTCCGATCTGGGAATGTGTCGTCTGTGCTACGGAATGGACTTGTCAACCGGTTCGCTGGTTGAAGAAGGTCTGGCCGTCGGGATCATCGCTGCTCAAAGTATCGGTGAGCCTGGTACGCAGTTGACGATGCGTACGTTCCATATCGGGGGCGTCGCGATCAAGGATATTCAGGAAAGCGAAATCAAGTCGCGTCGAGCCGGTCATGTGCGACTGGCGCGAATTCGTAGCGTTGTGAACGCTGACGGTAAGAGCGTGGTGCTCGGGCGAAACGGCGAGATCCTCGTCGTGGACTCGAAGGATCGCGAGCTCGAACGGTACACAGTTCCGACCGGGGCTGTGCTGCAAGTTGCTGAGAACGAGAACGTGGCTGTGGGCCAGGTGCTTTGCACGTGGGATCAGCACTCGATTCCGATTCTCTGCGAAGTCGGCGGTCGTGTTCGCTTCGAAGACTTGATCGAAGGACAGTCGATTCGATCTGAGAAGGATCCAAGCGGCAACGTCCGTAAGACCGTCATCGAACACAAGGGCGATCTGCATCCACAGATCGTGCTGGAAGATTCGACCGGCAAGATTCTGGACTTCTACTACTTGCCTGAACGGGCGAGTATCGAAGTGATTGAAGGCCAGCAGATTTCTGCTGGTACGGTTCTCGCGAAGAACCCACGTGAGACGTCTGGTACGCAGGACATCACCGGGGGTCTTCCACGAGTCACCGAACTGTTCGAAGCTCGGAAGCCGAAAGAGCCCGCGATCATCGCGGAAATCGACGGTGAAGTTGAACTTGTCGCCGAGAAGAAGCGCGGTAAGCGAATCATCATCGTTCGTGGTGCTGACGGTACCGAGAAAGAGCACGTCATTCCGCACGGCAAGCAGTTGCTCGTGCACGCCAAGGATCAGGTGCGGGCCGGGGACGCATTGGTTCGTGGTCCGTTGGTTCCACACGACATTTTGCGGGTCAGCGGTGAAGAAGCCGTGCAGCAATACTTGCTTCACGAAATTCAGACCGTGTACCGCTCACAGCGCGTGGTGATCGACGACAAGCACATCGAAATCGTGCTGTCGCAGATGTTGCGTAAGCTGAAGGTTGAAGATGTGGGCGATACGGTCATGTTGCCAGGCGTGCTGGTTGACCGCTTTGAGTTCCGCAAGATCAATCAGAAGCTTCAATCCAGTGCCCGCGTGACCGATCCGGGCGATTCCGAATTCCACGAAGGCGATGTGGTTCCACTGGAAACCATCGAACAAGTGAATCGCGAAATCGAAGGATCGAACGGTTCGCTGATCAAGACGGCAAAGCCCAAGCCCGCCAATGCGAGCACCCAGTTGCTGGGGATCACGAAAGCGGCTGTTCAGAGCGACAGCTTCATTTCGGCAGCCAGCTTCCAGGAGACGACAAAGGTGTTGACCGAAGCCGCGATCGCCGGCAAGATCGACAATCTGGTTGGCTTGAAGGAAAACGTCATCCTCGGTCACTTGATTCCAGCCGGTACTGGCTTCCAGCTGCATCAGCAGTCAGAAGTGAAGATCAAGCCGGAAGCACTGGCCGAAATTTATGCCGAACGTGACCGCATCTTGGCTGCTCGGGCCAACTTGCTGAACGAGCCGGATCTGACGAATACGATGACGGATAACAAGTAA
PROTEIN sequence
Length: 1394
VSVGETTYDRVNEYSAIKIGLASPQDIRGWSFGEVKKPETINYRTYRPERDGLFCERIFGPEKDWECACGKYRGMKYKGMICDRCGVKVTHSRVRRKRMGHIELAAPVVHIWFFKSMPSRLGALLNVKTTALEKVVYFQDYIVLDPGDTPLRKGQLLTEEEARQARAKYGEGTFEIEMGADAVKKLLTGLNLRELSEQLRVELKKTSSQQKKKELIKRLKIAEALRDSDNKPEWMVLDCVPVIPPDLRPLVLLDSGNFATSDLNDLYRRIINRNNRLKKLVDLNAPEVIVRNEKRMLQQSVDALFDNNRCKRPVLGSSNRPLKSLTDMIKGKQGRFRENLLGKRVDYSARSVIVVGPNLELHQCGLPKKIALELYQPFIIRRLKELGHADTIKSAKRMLERRDEEVWDILEEVITNHPVLLNRAPTLHRMGIQAFEPILVEGNAIRIHPLVCKGFNADFDGDQMAVHLPLSIEAQVEATTLMMSTNNIFSPSNGAPIISPSQDIVMGCYYVTLKKAERPGDGMIFASTQEVHTAFLLGKVTLHTAIKVRMPKDKRVKGEGSDDYSLGGVVETSVGRIMFNDILPPKMAFYNQTMKNKDLANVISDCYLELGRRQTIKLLDRMKEVGFRESTRSGLSFAASDLKTPDNKEKVILAAEATVLKKQKLYEKGVITAKERYEQVLDTWTHASDQIKIAMMEAFKNDHRDNGHYVNPVYLMADSGARGGQEQIRQLAGMRGLMAKPSGEIIETPIKANFREGLSVLEYFSSTHGARKGLADTALKTADSGYLTRKLADICQNMVVTTHDCGTTKGITRGVVYRGEKVEVSLADAIRGRVSRQNIVNRSPMTCESDLGMCRLCYGMDLSTGSLVEEGLAVGIIAAQSIGEPGTQLTMRTFHIGGVAIKDIQESEIKSRRAGHVRLARIRSVVNADGKSVVLGRNGEILVVDSKDRELERYTVPTGAVLQVAENENVAVGQVLCTWDQHSIPILCEVGGRVRFEDLIEGQSIRSEKDPSGNVRKTVIEHKGDLHPQIVLEDSTGKILDFYYLPERASIEVIEGQQISAGTVLAKNPRETSGTQDITGGLPRVTELFEARKPKEPAIIAEIDGEVELVAEKKRGKRIIIVRGADGTEKEHVIPHGKQLLVHAKDQVRAGDALVRGPLVPHDILRVSGEEAVQQYLLHEIQTVYRSQRVVIDDKHIEIVLSQMLRKLKVEDVGDTVMLPGVLVDRFEFRKINQKLQSSARVTDPGDSEFHEGDVVPLETIEQVNREIEGSNGSLIKTAKPKPANASTQLLGITKAAVQSDSFISAASFQETTKVLTEAAIAGKIDNLVGLKENVILGHLIPAGTGFQLHQQSEVKIKPEALAEIYAERDRILAARANLLNEPDLTNTMTDNK*