ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_58883_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(1333..2334)

Top 3 Functional Annotations

Value Algorithm Source
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 329.0
  • Bit_score: 454
  • Evalue 8.80e-125
phenylalanyl-tRNA synthetase n=1 Tax=Schlesneria paludicola RepID=UPI00029A532D similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 333.0
  • Bit_score: 657
  • Evalue 3.70e-186
phenylalanyl-tRNA synthetase, subunit alpha similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 329.0
  • Bit_score: 454
  • Evalue 1.80e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1002
ATGGATCTTGGTCAGACGTTTGCCAACTTTCAGAATCTTGCGATGAACGCGATTGCGGCTGCGGCGAATACGGCCGAATTGGAACAAGTTCGAATTGAGTTTTTGGGAAAGAAGCAAGGCAAGCTCAAGGATCTGCAGACCGTATTGGGACAGGTTCCTCCTGAGCAGCGTCCAGAAGTTGGCAAGCGATTCAATGAGATCAAGGATATCGTTACCAAGGCGTGGGAAGAACGACAGCTGTTGTTGAACCGGCCGAAAGTTGCCGCAACGGCCATCGATATGACCTTGCCTGGGATTCGTCCGGCCACTGGAAAGCTGCATCCACTCACGCAAACGATCAATGAATTCCAAGAGATCATGTCTCGCTTCGGTTTCGAAGTCGAAGATGGTCCGGAGATTGAGGACGAGTGGCACAACTTCGTGGCCCTCAATATTCCAGATGATCATCCAGCTCGCGATCCGCTTGATAACTTCTATCTCGCGACGGCCGCCGTTGCGGGGGGCGGACCACGCCTGCTTCGTAGCCAGACGTCGACAATCCAGATTCGGGTTATGGAGAATCGTAAACCTCCCGTACGGATCGTTTCGATCGGACGTGTCTATCGCCCGGATGAGATCGACGATACCCATCACCTGATGTTCCATCAGATGGAAGGGTTGATGGTCGGTCCCGACGTCACCATGGCGTCACTGAAGACCGTCCTTCGTCTGTTTGCCGCGGCATATCTGGGCGAAGATGTCCACGTCCGATTCCGCCCATCGTTCTTTCCTTTCACCGAGCCGAGCGTCGAATTCGACGTACAGCGTGGCAACGGGTGGCTCGAATTGGGCGGCGCCGGAATGGTTGATCCCAACGTTCTGCGAGCTGTCGGTTACAACCCGGATGAAGTCAGCGGATTTGCGTTTGGGTTGGGAATTGCCCGGTTCTGCATGATGCGGCATGACATCAAGAACATTCGGCACTTCTACTCAAACGATCTGCGTTTCCTCCAGCAATTCTAA
PROTEIN sequence
Length: 334
MDLGQTFANFQNLAMNAIAAAANTAELEQVRIEFLGKKQGKLKDLQTVLGQVPPEQRPEVGKRFNEIKDIVTKAWEERQLLLNRPKVAATAIDMTLPGIRPATGKLHPLTQTINEFQEIMSRFGFEVEDGPEIEDEWHNFVALNIPDDHPARDPLDNFYLATAAVAGGGPRLLRSQTSTIQIRVMENRKPPVRIVSIGRVYRPDEIDDTHHLMFHQMEGLMVGPDVTMASLKTVLRLFAAAYLGEDVHVRFRPSFFPFTEPSVEFDVQRGNGWLELGGAGMVDPNVLRAVGYNPDEVSGFAFGLGIARFCMMRHDIKNIRHFYSNDLRFLQQF*