ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_55770_5

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(5404..5802)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI000299FE0E similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 132.0
  • Bit_score: 262
  • Evalue 1.40e-67
Vegetatible incompatibility protein HET-E1 {ECO:0000313|EMBL:EDL59995.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 131.0
  • Bit_score: 164
  • Evalue 5.50e-38
WD40 repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 149.0
  • Bit_score: 110
  • Evalue 3.30e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 399
GTGACTTGGAAGGGTGATGGAAGTCGCATTGCCAGTGCAGGGGCCGACAATGCGATCAAGGTGTGGAATGTGGAAACTGGTGAACAACATCGGACAATCCAGAACTATGCCAAGCAGGTCACCGCGATCCACTTTATCGGAGCGAGTGACAACCTCATCAGTGGTAGCGGCGACAAGACCGTGAAGATGCACCGCTCGAATGATGGAAATAACTATCGCACTTTCGCGGGACCGACGGACTTTGTGTATGCCGTCGCAGCAACGCGAGACGAAAGTCTGGCCGCAGCCGGTGGAGAAGACGGCATCTTCCGTGTCTGGAATGGCACGAATGGCCAGGAACTCTACAAGTTCGAAGTGCCTAAACCCGCAGCCGACAATACTCATGCGAGCGCGAAATAG
PROTEIN sequence
Length: 133
VTWKGDGSRIASAGADNAIKVWNVETGEQHRTIQNYAKQVTAIHFIGASDNLISGSGDKTVKMHRSNDGNNYRTFAGPTDFVYAVAATRDESLAAAGGEDGIFRVWNGTNGQELYKFEVPKPAADNTHASAK*