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2019_SCN_bioreactor_t3_planktonic_scaffold_56067_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 3756..5528

Top 3 Functional Annotations

Value Algorithm Source
WD-40 repeat-containing protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B28C1 similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 594.0
  • Bit_score: 604
  • Evalue 1.10e-169
WD-40 repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 336.0
  • Bit_score: 245
  • Evalue 3.80e-62
WD-40 repeat protein {ECO:0000313|EMBL:ADB17906.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 336.0
  • Bit_score: 245
  • Evalue 1.90e-61

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Taxonomy

Pirellula staleyi → Pirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1773
ATGCAGCGTTTTGCCTGCCGACTGGCCGCCGTGTCGCTGATTCTGTTCGCAATGGATGGTGTTTTTGCCCAAGAGAATCTGGAGCAGAAGATTGCCGAGCAACAGAAGGTGGCGGATGAAACACAGGCGCGCAAAGTCGCTGGTGAACCTGCAATCAACGCTGCACGATCGGCCGCCAAAGAAAAAGCCACGGCGTTTTCGACCCTCAAACTCGAGCTCAACAAAGCAGAAGCATCGATCAAAGAGATTGATGGCAAACTTCCTAAACTGCAGGAAGCCGTAAAGAAGGCCGGCGAGGAACGCACGAAAGCCGAAACAGAACTGGCGGCATTTACGAAAGCAGCTGTCGAAGCAAAAGGAAAAGACACGGAGCAAGCGGAAGCCGACAAGGTAAAAGCCGCATCCGAGAAGCTGGTCACCACGACAAAGGCGCTCGAAGACGCGTTAAAGGCAGTGCAACCGATCGAAGTGACCTTGGCGGCTTCCAAAAAAATTGTTGCGGAGCAGCCAGCCAAGATTAAAGCCGCTGAAGCCGCGGTAACGGCATTCCAACCAGAAATCGACGCGGCTGAAGCCACATTTGCGGCGCTCAGCAAAGAGGCCGTCAGCCGACAAATCGAACTCGAAACAAGCCTGGTGGCAGCCGGTCGGTTGGTCTCGTTCGCAAAACAGGTTGCGCCCATCTTCTCAGAACGATGTCTGGCCTGTCACAACGCGCGAACCGCCAAAGGCCGCCTGAACATGGAAAGCTTCGCGAATCTGATGAAAGGTGGCGAAAGCGGTCCATCCGTCGTCGCGTCAAATCCAGGCGAATCCATGTTGCAATCGATGATCGAAGATCACTCGATGCCTAAAGACGCTGATCCACTGCTGCCAGAGCAAATTGCGATCATTAAGAAGCTGGCAACGTCCGGCTATCGCGAAGTCCTTCTATGGAATCCCGCTGACGGACAACTCGTTCGTCGCATCAAGAATTTGGCGGAACGTCCGCATGATCTTGAGTTCAGCGCCGATGGAACGGTCTTGGCGGTTGCCGCCGGAACACCGGGACAAATGGGCGAGGTCAAATTATTCAATGTCGCCGATGGCGCCTTGTTGGCCGATCTGTTCACGACTGACGACGAAGTCTTCTCGGTCGCATTCAGTCCAGATGGCACCCGTCTTGCCGCTGCTTGTGCCGACCGATCGGTTCGACTGTTCGATGTCGCAACTCGCAAACAACAGAAGCTGATCGAAGACCATGCCGATTGGGTCATGGACTTGGCTTGGTCGCCCGATGGGAAGAAGATCGTTACCGCGAGTCGTGACAAGACCTGCAAAGTGTTCGACAGTGTGACCGGAGAATCTCAGGCGACCTTCAACGGCCACGGGCAACCCGTCTTCGGAGTCGGTTTCTTGCCAGACGGCGCATCGGTCGCGTCGAGTGGCCGCGACAATCGAATTCGAGTCTGGAACGCCGCCGACGCCAAGCAGGCCCGGGAAATCGTCTTGGGTGGCGAAGTCTTCCACCTGACGATGCAGGCAGATGGAACGGCATTCAGTGGCAGCGCTGACAAATTCGCTCGTCAACACAATCTGACAAACGGAGCCGAAGTGAAAAAGTTCGGACCGCAGACAGATTGGGTCTATGCGGCGGCTTACCATGCCGGTTCGAAACGAGTCGCTAGTGGTAGCCACGATGGCGAAGTTCGAATCTGGAACTACGACGACGGAAAAGAACTTCTGAAGTTCATCGCCGCTCCAGGGATCACTCAACCAATCGCCGCCAAATAG
PROTEIN sequence
Length: 591
MQRFACRLAAVSLILFAMDGVFAQENLEQKIAEQQKVADETQARKVAGEPAINAARSAAKEKATAFSTLKLELNKAEASIKEIDGKLPKLQEAVKKAGEERTKAETELAAFTKAAVEAKGKDTEQAEADKVKAASEKLVTTTKALEDALKAVQPIEVTLAASKKIVAEQPAKIKAAEAAVTAFQPEIDAAEATFAALSKEAVSRQIELETSLVAAGRLVSFAKQVAPIFSERCLACHNARTAKGRLNMESFANLMKGGESGPSVVASNPGESMLQSMIEDHSMPKDADPLLPEQIAIIKKLATSGYREVLLWNPADGQLVRRIKNLAERPHDLEFSADGTVLAVAAGTPGQMGEVKLFNVADGALLADLFTTDDEVFSVAFSPDGTRLAAACADRSVRLFDVATRKQQKLIEDHADWVMDLAWSPDGKKIVTASRDKTCKVFDSVTGESQATFNGHGQPVFGVGFLPDGASVASSGRDNRIRVWNAADAKQAREIVLGGEVFHLTMQADGTAFSGSADKFARQHNLTNGAEVKKFGPQTDWVYAAAYHAGSKRVASGSHDGEVRIWNYDDGKELLKFIAAPGITQPIAAK*