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2019_SCN_bioreactor_t3_planktonic_scaffold_79741_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(317..1033)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Schlesneria paludicola RepID=UPI00029B07E4 similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 238.0
  • Bit_score: 435
  • Evalue 2.80e-119
RNA polymerase sigma-70 factor, ECF subfamily protein {ECO:0000313|EMBL:EDL56966.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 195.0
  • Bit_score: 243
  • Evalue 2.90e-61
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 202.0
  • Bit_score: 238
  • Evalue 1.40e-60

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Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 717
ATGAACTCTTCCGACGCTGGCCCGACATCGCCCTCGACAGACGTCTTGTTGTCGAATCAATCCACTACGGTCGCCGAACGTTCGGTTGCGTCAAGTCGGGATGAAGATGACGAGTTGATGTATCGGATGCAGGGCGGTGATCGCTTTGCATTTGACCGACTTGTCGCACGCCACCAGGGATCGCTGGCGCATTTCTTTTTTCGACATTTGCGAGATTGGCAACTCGCTGAAGATTTGACGCAAGAGACTCTGATTCGCGTCTATAACACGGCGTGGGATTATCTGCCCCGCGGTAGTTTTAAAGGATGGATGTATCGAATTGCGCGCAACTTGATGATCGACAGCACGCGACGACGATCGCACGATGCGTTGGTCAGCGCAATTCGGTCCCAACGTCCGCGGGATGACGAAGACGATGCGCTGGAACGACTGGCCGGCGAATTTGTGCTGCCCGAAGACAAGGCCGATCAAAATGAATTTGCCAAGATTGTCGGGGACCTTCTCACGAAAATTCCCGAAGATCAGCGTCTCACTTTCACAATGCATCATTACTCAGGGTTGAGCTTGCCAGAAGTGGCAGACGCGATGGAATCGAATTTGCCAACAACCAAAAGTCGTCTGCGATTGGCTCGAGAAAAATTGCGAGATTTGCTTGCGGCTCGCGGAATTTTCGATCCTCATATCAAAAGCGAAGAACGGACTGAAGGATCGTCCTGA
PROTEIN sequence
Length: 239
MNSSDAGPTSPSTDVLLSNQSTTVAERSVASSRDEDDELMYRMQGGDRFAFDRLVARHQGSLAHFFFRHLRDWQLAEDLTQETLIRVYNTAWDYLPRGSFKGWMYRIARNLMIDSTRRRSHDALVSAIRSQRPRDDEDDALERLAGEFVLPEDKADQNEFAKIVGDLLTKIPEDQRLTFTMHHYSGLSLPEVADAMESNLPTTKSRLRLAREKLRDLLAARGIFDPHIKSEERTEGSS*