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2019_SCN_bioreactor_t3_planktonic_scaffold_70306_7

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(6686..7930)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 301.0
  • Bit_score: 438
  • Evalue 6.20e-120
ribonuclease n=1 Tax=Schlesneria paludicola RepID=UPI000299F4D1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 298.0
  • Bit_score: 562
  • Evalue 2.00e-157
YmdA/YtgF protein similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 301.0
  • Bit_score: 438
  • Evalue 1.30e-120

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1245
ATGGAAATTGTCTGGATTTTGGCGAGCCTCGCCGGGGGCGGCGCGGTGGGCTTCTTCGCCGAGCGACTGATTCGCGGTACGGCATACAAATCGCGCGATGAAATTCTTGAGTCGGCAAAACGTGATGGCGAAGCCCTGCGCAAAACTGCCGAGCTGGCCGCCAAAGAAGAATCGCTCCGACGACGTGAAGAGGCCGAAAAAGAACTGAATTCGTTCCGCGATGAAATCCGCAATCAGGAACGAAAGCTTGATAAACGCGAGTCCGGCCTGAAAGAACAGCAGGACGATATCGCAAAAAAAGAACGAATGCTGGAATCGACGCAGTTGAAATTGTCCGAGCGTGGCAAGGTCGTCGACGCCCGCGAGAAAGAACTCGAAAAGATCATCAAACAAGAGCAAGAACAGCTCTACAAGATCAGCGGTCTCGACCAGAAGACCGCCACCGCCATGTTGATGGATCAACTTGAACGTGAACTCAAGAACGAGACCGGTACGCTGATCCTGAAGCACGAAGCCGAACTCAAGCAACAGTCTGAAAAGCTGGCGCGCGAAATCATCGGCATGTCAATTCAGAAGTACGCTTCAGCACACACGTCCGAAACGACGGTCTCGACAATCGATATCCCGAATGACGAAATGAAAGGCCGTATCATCGGCCGCGAAGGCCGCAACATCCGCGCCTTCGAAAAGGCGACGGGCGTCGACGTGATCGTCGATGATACGCCGGGCGTTGTCGTCGTTTCTGCATTCGACAGCGTCCGCCGCGAAACAGCCAAGCAAGCAATGGTCAAGCTGATCCAGGACGGTCGCATCCATCCCACTCGTATCGACGAGATTGTGCTCGAAACACAAAAAGAGATGGAAGAATTCATTCGGCGACAAGGAGCAGAAGCGGAAATCTCGCTCGGCGGTGCGGCTTCCTGCACGATATCGGAAAAGCCGCTGACCACGAGATGGAAGGTGGCCATCCTGCGGTCGGTGCAGAACTTCTCAAACGTTACGGTGAAAAAGGGGAAGTGGTGCATGCCGCGAAGGGCCACCACGACGATATTCGTCCAGAATATATCTACACCGTGCTCGTCGCGGCGGCAGATGCCTGTTCTGCCTCGCGTCCAGGTGCCCGCCGTGAAACGCTCGAAAAATACGTTCGACGCCTGGAAGAACTCGAGACGCTCGCATGTGGATTCCCGGGAGTTGAACAAGCCTTCGCAGTGCAGGCAGGTCGCGAAATTCGCGTCATCGTGA
PROTEIN sequence
Length: 415
MEIVWILASLAGGGAVGFFAERLIRGTAYKSRDEILESAKRDGEALRKTAELAAKEESLRRREEAEKELNSFRDEIRNQERKLDKRESGLKEQQDDIAKKERMLESTQLKLSERGKVVDAREKELEKIIKQEQEQLYKISGLDQKTATAMLMDQLERELKNETGTLILKHEAELKQQSEKLAREIIGMSIQKYASAHTSETTVSTIDIPNDEMKGRIIGREGRNIRAFEKATGVDVIVDDTPGVVVVSAFDSVRRETAKQAMVKLIQDGRIHPTRIDEIVLETQKEMEEFIRRQGAEAEISLGGAASCTISEKPLTTRWKVAILRSVQNFSNVTVKKGKWCMPRRATTTIFVQNISTPCSSRRQMPVLPRVQVPAVKRSKNTFDAWKNSRRSHVDSRELNKPSQCRQVAKFASS*