ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_71521_10

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 7323..8000

Top 3 Functional Annotations

Value Algorithm Source
glycosyl hydrolase n=1 Tax=Schlesneria paludicola RepID=UPI00029B2A7F similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 225.0
  • Bit_score: 418
  • Evalue 2.60e-114
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 211.0
  • Bit_score: 253
  • Evalue 3.10e-65
Uncharacterized protein {ECO:0000313|EMBL:AGA80129.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 211.0
  • Bit_score: 253
  • Evalue 1.50e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Echinicola vietnamensis → Echinicola → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 678
ATGTCTCGTCGGATCTCTGTGCTCGTCGCGTTGATGACTGTCGCGATCAGTGTGTGTTCGCTGAAAGCCGCTGAAACGCCATTCACTCCCGACCCCGGTTTCGTGTCGCTTTTTGATGGGAAGACCCTGAAAGGTTGGAAACGCTCAGAGTCAAGTTATGCCGTCGAAAACGGGGACCTCGTGGCGGTGAAGGGCGGGAAGGGAAATCTGCTGACCGAGAAGGAATATGAAAACTTCACCATCAAGTTCGAGTTCAAACTGACCCCAGGCGCAAACAATGGTCTAGGAATCCGCACTCCACTCATGACCGAAGGAAGCTTGCACCTGCTTGGTACCGAATTGCAGATTCTTGACGATACCGCAGACCAATATAAAGAGCTGAAGCCTTACCAATACCATGGTTCGGTCTATGGAGTTGTGCCTGCCAAACGTGGCTCACTAAAACCACTTGGTGAATGGAATTCGCAAGAAGTCACGTTGCAAGGACGTAAGATCAAGATCGTCGTCAATGGCCAGACGATCGTGGATGCGGATCTCGACGAAGCCACGAAATCGGGCACGCTGGACGGACAAGAACATCCAGGGCTCGCACGAACCAAAGGTCATCTCGGATTTCTCGGACACGGCGACCGTGTTGACTTCCGCCATATTCAGATCAAAGAACTGCCAGCGAAGTAG
PROTEIN sequence
Length: 226
MSRRISVLVALMTVAISVCSLKAAETPFTPDPGFVSLFDGKTLKGWKRSESSYAVENGDLVAVKGGKGNLLTEKEYENFTIKFEFKLTPGANNGLGIRTPLMTEGSLHLLGTELQILDDTADQYKELKPYQYHGSVYGVVPAKRGSLKPLGEWNSQEVTLQGRKIKIVVNGQTIVDADLDEATKSGTLDGQEHPGLARTKGHLGFLGHGDRVDFRHIQIKELPAK*