ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_80135_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(2482..4356)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B062C similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 467.0
  • Bit_score: 815
  • Evalue 2.00e-233
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:EMI57517.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.7
  • Coverage: 159.0
  • Bit_score: 106
  • Evalue 8.40e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopirellula sallentina → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1875
ATGGCGATTGCCGAGATTGCCGAATCGTCGTCATCCGCCCCATTGCGAAATCCGTTTCGGGGATCGGTGCTAGGCGACGCATGGGTGGCCGGAGATGATCGAAGTGATGTCGCTACGATTCATCGCAAGCCGTTCGAAAAATGCTGTGAAGCGGTCGATTGGGTCCGTCATGGAAACTGTAGTGCCGGGATCGTGATTCATGGTGAAGCAGGCAGCGGGAAGACACATCTGATCCGCAGACTGCGGCATGAATTCACTGATCGATCGACGCATCCTACTCTTGAGCGAATCAGTCAATCGTTCGCGTACATTCCGCTGAACACGCATTTCACTTCGTTGGCGCGACACACCCGCCGATGTGTAGCCATCGATTTGATGCGAACTCCTGGCCGCGGCCCCTCGCAGCTTGAGCGATTAGTCGTCACGCAACTGATGAGCGTGGCCGACGGTGCTGGCGATCTGGCGCTGTGGTTGGGGCACTTTGTTCGCAACCGCCATCGTCTGGAAGTGGCGGGATGGCTTCGCGGCGACCCGTTGACGGATCTGGCCTATGAGCGACTTGAGATTGCGCCGGAAGATCCTGATAGCGATCCCGAGGGAATCGCGCGGCGAATGCTGTCGGATTTGATGAAGCTCGCCGGGCCGGAAATTCCGCTGGTTCTTTGTTTCGACCAGGTCGAGGCATTACAGAACGACCGCTCCGATACTCAGCCGTTCTTCGCGTACGCTCAACTGTTGGTTGATCTGTATGCCGCGGATACGAATCTCGTCCTGATTTCGTGCATGCAAACGCAGTTTGTACAAGAAATCAGTGCCGCGATTCCTGAGTATGCCTGGGCACGGATTTTGAGTTTTGCGACCTGCAGCTTGGCACCACTCGATCTGATCCAGGCACGAGCCCTCATTTCGTCACGGTTGACCGGCGATGGTCAAATTCATCCGCTGACGGATAGTGATTTGCACACGATGATGGGACGTTTGGGCTTCGCTCATCCTCGCGCACTTTTGGATCGTGCCGCACGCCGTTTTGATCAAATCACGGGACGACTATCTCCTGCAAGCGAATCGACATTGCCAGATTGGCTGGCGAATGAATGGGAGCGACGGTCTGAGCAGGCGTCGCGAGAGAATCAGCCGGGTTCCATTGGGGAGACGCTTCGCCACGGAATTCCACTGCTCATTCGAGCGGTCGAGCCGCAGTGGACGACAGGAACTCATCCCAATAAGTCGGTGGTCGACTATGTTCTGTCGGGGCCTCAGAAAGAGGCCCAGGTGGGGATCAAGATTTGCGACGACGATGGCAAACGGCTTTGGGGCCAGCTTAAAACCCTCAACGATGCGTATCCCAGTCAATTGCGCCTACAAAAGCTAGTCCTTTTGCGAGATGAGCGTACGCCAATCAGCAAGACGGCGGTTCAGACGAGGCAATTTCTCGACAAGCTCGAGCGCAAAGACGCCGTGTTCTATCGCGTGCCTCCCGAGGCGCTGATTGCCTTAGATGCTTTGCGGCGTCTGATGGCGGAATCACAGGCAGGTGACCTCGATTTTGAAGGCTCAGTCGTGCCACCTGAGTCCGTCATCGAATGGCTGCGCCAGAATATTCCCGGCGTCTTGAAGGAGATGGCTGACCTTTTGGTGACGCCTCACGGCCTCGAACACTTAACGACACAGGTGGATTTACTACAAGAGTTTCTTGCAGAGGAGTGCTTGACGTCGATGACCAGGGCAGCGGAGAAACTCAACGTTTCGGCGGACCAGTTACTCGCCACTGCGAACAGTCGTGGAGACTTGTTTGGTGTCGTGAGTGGTGAGCCCGCCGTGATTTTTTCGGTGCGAGCAGGCAGTCAGTGTCTTACCGCAGCATCGAGCGAGTGA
PROTEIN sequence
Length: 625
MAIAEIAESSSSAPLRNPFRGSVLGDAWVAGDDRSDVATIHRKPFEKCCEAVDWVRHGNCSAGIVIHGEAGSGKTHLIRRLRHEFTDRSTHPTLERISQSFAYIPLNTHFTSLARHTRRCVAIDLMRTPGRGPSQLERLVVTQLMSVADGAGDLALWLGHFVRNRHRLEVAGWLRGDPLTDLAYERLEIAPEDPDSDPEGIARRMLSDLMKLAGPEIPLVLCFDQVEALQNDRSDTQPFFAYAQLLVDLYAADTNLVLISCMQTQFVQEISAAIPEYAWARILSFATCSLAPLDLIQARALISSRLTGDGQIHPLTDSDLHTMMGRLGFAHPRALLDRAARRFDQITGRLSPASESTLPDWLANEWERRSEQASRENQPGSIGETLRHGIPLLIRAVEPQWTTGTHPNKSVVDYVLSGPQKEAQVGIKICDDDGKRLWGQLKTLNDAYPSQLRLQKLVLLRDERTPISKTAVQTRQFLDKLERKDAVFYRVPPEALIALDALRRLMAESQAGDLDFEGSVVPPESVIEWLRQNIPGVLKEMADLLVTPHGLEHLTTQVDLLQEFLAEECLTSMTRAAEKLNVSADQLLATANSRGDLFGVVSGEPAVIFSVRAGSQCLTAASSE*