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2019_SCN_bioreactor_t3_planktonic_scaffold_58371_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(1325..1744)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Schlesneria paludicola RepID=UPI00029AD721 similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 137.0
  • Bit_score: 247
  • Evalue 4.90e-63
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 130.0
  • Bit_score: 128
  • Evalue 1.20e-27
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA27495.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 130.0
  • Bit_score: 128
  • Evalue 6.00e-27

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 420
GGTCGCGGGTCATTTCGGGCCTGGATCTCGACGATCACACGCAACTTGGTTGTCAATTTTCTGATCCGTCAATCGCGACACCCTCGCGGCAGTGGCGACACCGGGGTCAATCAATGGCTCAATCAAAAACCGGCGCCCGACTGCGAAGCGTCGCGAGTGTTCGACCTGGAACGAAGACGTCAGATTTTTCGCTGGGCGGCAGAACAGGTGCGACCAGAATTTCGTGAATCGACCTGGCAGGCGTTCTGGCTGACCTCAATTGACGGCTACGAAGTCATCGCGACAGCACAGCAGTTAGGGATTTCGCCCGGCGCGCTTTATGTCGCCCGTAGTCGCGTCATGAAACGAATCCGCGAAAAAGTCGAAGAATTTCGAGATCTGCCTCCAGCAGACAACATCGATCTTGAACCGCATTCATAG
PROTEIN sequence
Length: 140
GRGSFRAWISTITRNLVVNFLIRQSRHPRGSGDTGVNQWLNQKPAPDCEASRVFDLERRRQIFRWAAEQVRPEFRESTWQAFWLTSIDGYEVIATAQQLGISPGALYVARSRVMKRIREKVEEFRDLPPADNIDLEPHS*