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2019_SCN_bioreactor_t3_planktonic_scaffold_53651_6

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 7757..8707

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 276.0
  • Bit_score: 290
  • Evalue 3.20e-76
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 276.0
  • Bit_score: 290
  • Evalue 1.60e-75
tRNA pseudouridine synthase A n=1 Tax=Schlesneria paludicola RepID=UPI00029ABAC7 similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 316.0
  • Bit_score: 556
  • Evalue 1.50e-155

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 951
GTGTCTGCGGTAGATCGAGACGGCCCCGCAGAGCGGATTTCGGTTCGCGATCGCGTCACGCTTTCTGACGATCGCGATGCTCCACAACCTGACCCACAGACTCCGTTGGAACCTTCTCACCAAACGTGGCGAATGACCGTCGCCTATGACGGTACAAACTATTGTGGTTGGCAGATCCAGCCCAACGGGATTTCGTTGCAGTCCGTTGTCGAAGAGGCGCTCACGCAGTTTACGCGCGAACCAATCAAAGCGGTGGCATCTGGCCGCACTGACGCCGGTGTCCATGCACTTGGGCAAGTTGTCAGTTTCTCCACAGCGTCAACAGCGCCCGCGCACGCCTATTTGCATGGTTTGGCCCAATATCTTCCCGATGAAATTGTCGTGCGGGATGTTCAGACTGCGCCGGAAGGCTTCAACGCGCGCTATGACGCCCAGCGGAAATGGTATCGATACGTCATTCACAACAGCGTGATTCGTCGGCCGTTCCTCAGAAACGCCGTTTTGTGGCAGCGATCAAGGCTGGACCACGAGGCGATGCATGCGGCCGTGCAGTATCTCGTGGGAACCCACGATTTTCGGTGCTTCGAATCGAACTGGCCCAATCGATCGTCAAGCGTGCGAACCATCATGCATGCCAGCGTAATCCGCACAGCTGGCTGGGATGTTTGGGAGGATCTTGCTCCAGCAGTCCCAGGTGAATCGCAACACGCGCGTAGCTCCGTCGCGAGTACATCGACTTTGGACACCGAACCATCGTTTGTTTGCTTCGACGTCCAGGCGGATGGCTTTCTTTACAACATGGTGCGCGCCATCGTCGGTACACTAATTCATGTCGGTCGTGGACGCTGGACGCCCGAAGACATGCGAAGAATTCTCGAGACCGGCGACCGGACACATGCAGGCGAAACAGCCCCCCCGCAGGGGCTGTACCTGATGCGTGTCGACTATTGA
PROTEIN sequence
Length: 317
VSAVDRDGPAERISVRDRVTLSDDRDAPQPDPQTPLEPSHQTWRMTVAYDGTNYCGWQIQPNGISLQSVVEEALTQFTREPIKAVASGRTDAGVHALGQVVSFSTASTAPAHAYLHGLAQYLPDEIVVRDVQTAPEGFNARYDAQRKWYRYVIHNSVIRRPFLRNAVLWQRSRLDHEAMHAAVQYLVGTHDFRCFESNWPNRSSSVRTIMHASVIRTAGWDVWEDLAPAVPGESQHARSSVASTSTLDTEPSFVCFDVQADGFLYNMVRAIVGTLIHVGRGRWTPEDMRRILETGDRTHAGETAPPQGLYLMRVDY*