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2019_SCN_bioreactor_t3_planktonic_scaffold_53872_5

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 6361..6678

Top 3 Functional Annotations

Value Algorithm Source
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 88.0
  • Bit_score: 76
  • Evalue 2.10e-11
exodeoxyribonuclease VII small subunit n=1 Tax=Schlesneria paludicola RepID=UPI00029B46CF similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 105.0
  • Bit_score: 184
  • Evalue 5.00e-44
exodeoxyribonuclease VII small subunit similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 88.0
  • Bit_score: 76
  • Evalue 4.10e-12

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Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGCCTAAGTCTGCCACAAATCGTAAATCCACCGCTGAAGCCGAGAATCCGTCCGAACCCTGTCAGACTTTTGAAGAGGCGATGTCGGATTTGCAGCAGATCGTTGCTGATTTGGAAGATAACGCCCTCGGTCTCGAAGCTTCGCTATCTCAGTTTGAACGCGGGATTGGACTGTTGCGAAAATGTCACGCCTTCCTGGAACAGGCTGAGCAGAAAATTGAGATTCTGGTCAGCCTGAAAGAGAATGGCGAGGTCACAACGGCCCCATTTGACGCCGCGCCGACGGCAGGGACGGCTGATTCAAAGACTCTTTTTTGA
PROTEIN sequence
Length: 106
MPKSATNRKSTAEAENPSEPCQTFEEAMSDLQQIVADLEDNALGLEASLSQFERGIGLLRKCHAFLEQAEQKIEILVSLKENGEVTTAPFDAAPTAGTADSKTLF*