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2019_SCN_bioreactor_t3_planktonic_scaffold_81667_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 4547..5188

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 ECF-like protein n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U7U6_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 197.0
  • Bit_score: 171
  • Evalue 5.20e-40
RNA polymerase sigma-70 ECF-like protein {ECO:0000313|EMBL:EMI57537.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 197.0
  • Bit_score: 171
  • Evalue 7.30e-40
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 193.0
  • Bit_score: 158
  • Evalue 1.70e-36

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Taxonomy

Rhodopirellula sallentina → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 642
ATGAACCAAGAAAATACTCCTGAGTCCGCGCATAATTCTGTGACGTGGTGGCTTGCTGGCCTGAAGGCGGGTGAGACAGAGGCGGTACGTCAGCTGTGGGAGCGGTATTCAGCGGCACTGATTGCTGCCGCTCGCAAGCAACTCGGCAATTCACCTCGTCACTCGGCTGACGAAGAGGATGTGATCGTGAGTGTCTTTGTCGCCCTGTGTCGGGGGGCAGAGGCGGGGCGATTTGAGGACATTCGTGGCCGCGACGATCTGTGGTGGCTATTGCTTTCGATGACGCAGCGCAAAGCGGTCAGTCAGCTACGGCGCGAGACGGCACTGAAGCGCGGTGGATGGAGGCAGGATCAATCGCTTGCGCCGATGCAATCCGAAAACCAAACTCCGTTTGCATACGAGTCACTGATTTCGAACGACCCTAGCCCAGAGTACCTGATGATCATGCAGGAAGAGCATGATGGGCTACTTGCCCTCCTCAGGAACGACACACTTCGCCAAGTCGCGAATCTACGGCTGGAAGGCTGTACCAATCAGGAAATTGCCGATCGATTGGGTGTCAGTACCCGGGCGATTGAGCGAAAGCTGAACCTAATCCGGCAAACCTGGTCGAAGGCTCACGACTCGTCGCAACAGGCCTGA
PROTEIN sequence
Length: 214
MNQENTPESAHNSVTWWLAGLKAGETEAVRQLWERYSAALIAAARKQLGNSPRHSADEEDVIVSVFVALCRGAEAGRFEDIRGRDDLWWLLLSMTQRKAVSQLRRETALKRGGWRQDQSLAPMQSENQTPFAYESLISNDPSPEYLMIMQEEHDGLLALLRNDTLRQVANLRLEGCTNQEIADRLGVSTRAIERKLNLIRQTWSKAHDSSQQA*