ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_82459_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 730..1239

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease II n=1 Tax=Schlesneria paludicola RepID=UPI00029A9623 similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 170.0
  • Bit_score: 293
  • Evalue 7.20e-77
exoribonuclease II similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 167.0
  • Bit_score: 233
  • Evalue 4.30e-59
Exoribonuclease II {ECO:0000313|EMBL:BAI61457.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 167.0
  • Bit_score: 233
  • Evalue 2.10e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanocella paludicola → Methanocella → Methanocellales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 510
ATGGCGCAGAATCTCGACGAACGACAACATCGCACGATTCTGAGAAAAATTGCGCGTCGAATCATGATCGAACGAGGGCTTGCTCCGGATTTTCCACCGGATGTCATGAAGGAACTGGCGCAGATTCGGGGGCCCGCAGAAGGATTCGATGGGGTCACGCGAGACCTGCGTAACTTCATCTGGTGTTCGATTGATAATGATGATTCTCGCGACCTCGACCAATTAAACGTCGCCGAAGCGTTGAGCGGCGGGGCATTTAAGGTTCTGGTCGCGATCGCGGACGTCGATGCAATCGTCAAGAAATACTCGGCGATCGACGATCACGCGCAGTGGAACACGACGTCGGTGTATACGGCGGCCCAAATGTTCCCGATGCTACCCGAAAAGCTGTCGACCGATCTGACATCTTTGAATTTTGAATGCGATCGATTGGCGATTGTCGTCGAAATGGTTTTCGATGCCGAAGGGGCACTTCAGCAGTCCGACCTCTACCGGGCTTTTGTCAGAAAT
PROTEIN sequence
Length: 170
MAQNLDERQHRTILRKIARRIMIERGLAPDFPPDVMKELAQIRGPAEGFDGVTRDLRNFIWCSIDNDDSRDLDQLNVAEALSGGAFKVLVAIADVDAIVKKYSAIDDHAQWNTTSVYTAAQMFPMLPEKLSTDLTSLNFECDRLAIVVEMVFDAEGALQQSDLYRAFVRN