ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_87769_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(2..601)

Top 3 Functional Annotations

Value Algorithm Source
ROK family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0V4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 200.0
  • Bit_score: 187
  • Evalue 1.10e-44
ROK family protein {ECO:0000313|EMBL:EDY19966.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 200.0
  • Bit_score: 187
  • Evalue 1.60e-44
xylR; xylose operon repressor similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 180.0
  • Bit_score: 99
  • Evalue 1.10e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 600
GTGCGGATCGGCGATGAATCAACCCGGAAGCTGGAAGCGTCCCTTATCCGCCATGTCCGCGCCCACACCGGCGTCACACGGGTTGAGCTTGCCCGCCGGATGGAACTTTCACCCTCCACGGTCGGGCAATATGTCGATCGGCTGGTCACGCGCGGACTGCTGATGGAGGGGCAGAAATCAACGACTTCAGCGGGCCGCCCCGCAACACGGTTGGATCTGAACCCCGCTGCCGGGCACTTTGTCGGCGTCGATTTCGAGGCGCGACACATTTGGGTTAGCGTCGTGGATTTCGCCCAAAAATTTCTGACACGGGCCAAAACCTCGATCCTGGCATCAGATTCCGCAGACGACGTGATCAACAAAATTCAGTCGTCAATTTCCACAACCACCGAAGGGTTGGGGCCAATGTTGGGGATTGGCGTAGGCACGCCGGGTGCTGTCGATACACTACGTGGCATCGGACTGCACTATCAATTCATCCATGACTGGAACGAGGTACCACTGCAACAACGGCTCGCTGACTTCTTCGCTGCTCCCGTTGCGCTCGAAAACAATATTCGAGTCATGGCGATGGCGGAAGAACTGTTTGGGCAGGGGCGC
PROTEIN sequence
Length: 200
VRIGDESTRKLEASLIRHVRAHTGVTRVELARRMELSPSTVGQYVDRLVTRGLLMEGQKSTTSAGRPATRLDLNPAAGHFVGVDFEARHIWVSVVDFAQKFLTRAKTSILASDSADDVINKIQSSISTTTEGLGPMLGIGVGTPGAVDTLRGIGLHYQFIHDWNEVPLQQRLADFFAAPVALENNIRVMAMAEELFGQGR