ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_88374_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(2..2236)

Top 3 Functional Annotations

Value Algorithm Source
regulatory protein blaR1 n=1 Tax=Schlesneria paludicola RepID=UPI00029B43B9 similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 756.0
  • Bit_score: 889
  • Evalue 1.70e-255
Regulatory protein blaR1 {ECO:0000313|EMBL:EMB18005.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.4
  • Coverage: 405.0
  • Bit_score: 137
  • Evalue 5.30e-29
peptidase M56 BlaR1 similarity KEGG
DB: KEGG
  • Identity: 27.5
  • Coverage: 462.0
  • Bit_score: 131
  • Evalue 1.00e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopirellula europaea → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 2235
GTCACCGGCATCTTGCTGGCGGCTTGGGGCATCAGTCGGTTTAACATTGCGCGTCCTGCGGTCTGTGATCTTGTCTGGCGCAGCTCACTCATTCTGATCGTTTTGGCACCCGGCGTTGTGGTGTGTCGTGCGATGGTCGTGGATTGGCAGTGGAAGATCCCCGTTTGGCCCGCAGAAATTGTTGTATCGACAGACTTGGGAACGACAAGCGGCCAGGTCTCCAACCCCAGAACGATCTTGTCTCACCCGCGAGAGAATCACCACGCGTTGACGCCCTCGCTCGCATCTCAAACAGTCGCTAAGAACTCACCGAGTGTGCTGGCTGAGGAAGAGCCCGCCGTGTTGGCTGCAGATCCTCTTCCGGCCACCCCACGCGACATGCCTGGCGAACCCCTCCCGGGTTCGATGCCGGATTGGTCGTGGTCGAGCGTCGTATTCGCGGTGTGGTCTTTGGGTGCGGCATTCCATTTGATCACCATTGGTATCTCGGCCAGAAATGGGAATCGTCTGCGACGTGCCGCCAAGCTTGTGACCGATGCCGAGTGTCTGGCGTTGCATCGTGAATGTGTTAATCGTGTGGGACTGCATTTTGTGCCTCCTGTCTCGGTGAATTCCGATCTATCCAGTCCGGTTGTGGTTGGGATGTTTTATCCGCAGATTGTGATTCCACCCAGTTTGCTGCGTACCGACGGTCAGCAGGATCTCAAGGCTGTCTTGCTACACGAATGCGGGCACTTAAAGCGGAATGATCTGGTTTTCGATCTGGTTCTGCGGTTCGCGCTGGCGATCTTCTGGCCGCATCCGCTGGTGTATGTGCTGGCCCGCGAAATACGCCGATTGCGCGAGGAAATGTGCGATAACTTTGTGCTTGTTCAGGAATCCGCGGTCCAATACGCCGAGACGCTGCTGCGTGTCGCTGTTGGCAAACGCCTGAATGAAGCCATGTTGCTGGGAATTGGCGTGTTCTCGAAATCACATCGCCTTGAGCAGCGAGTGGCATCACTCTTGTCTCCTTCACGTCGAATTGAAACTTCGGCACCACGACGGACGCAATTTCTCATCGTCGGGGTTGCAAGTGGTGTGCTCTTTGCCGGGTTCTCGATTCGACTGACATCCGTCGGCGCGGCACCGCCACGATCAGTCGTGTCGACGGCTGAGGTCCTCGAAGTCGCGGATGATGGCCCCGCAGAGTCGGTCGCTGCAGCTGCTCCAGGAGAAGGAGACAAATCTATCGACGCCGCATTTGAGAAGGCAGTGGCCGCTGCGGCAGCGAAGCCGATTGTCATTCAATTTCGCGTCGTTGATATGCAAGGCAGGCCGATTGTCGGAGCGCATGTGCTGCCCGGTGGGGTTTCTGATTTCCATGGAGCGTCTTGGGCCGGTGACAAAGGTTTGTGGCAGGTGGTTGAGAGTGACGACGAAGGGTTTGTCCGATTCCCGCTGCCGTTGGATGTTCTGAAGCAGGCAATTGTCATGCAGATCCTCAATGGTGACAGCAGTGGCACGAGTTCAATCTGGGGCAACGACCTTTATCCTGTCCCGGAGGGGTTCCCAACCGAGCTGAAAAAGCTTGGGATCAGGCAATTGTACTTACGAGTAGACCATCCCGATCACCCTTTGTCGTCGAACTATGTCGAACTGAAACACGATGCCCAAATTCAATTGGCGGATTCTGTGACCATCGTGGCCCGCGGACGACGGGCCGGTGAAGCAGGTCTAGCGCAACGAGTCGTGCCGCGGTTGACGAGTTCCCATTCAACAGATTGGGATGAAGATGCCGGCTTCGTGACATATCGACGCGTCAATCTGACAGATCTGAAAAGTTGTCCCTGTTTTCAATTGATCCAATTTCCTGAACAGGGCGGGGCGTGGTTCAGCGATATCGTCGATTTGAAACATCTCGCGGGCAATCCCGTATCGCTCGATCTCACGTTGAAACGCGGTGTTCGGTTGGCGGGGCGATTGGCTGATGACGTACCTCGTCCTGTAAAGAATGGGATCGTCTTTGGCAAGATGGTTCATCTTGTCGGGGATGATTCGCAAGGTACGGCCTGGAGCGTCAAGACGGCGGTCGACGAGGATGGCACGTTCGTGATGGAATCTTTGCCGTTCCACCAAACGCTGCAATTGATTGCACTCTGCGATGGCTGGAATTCTCGATCGCCATCGCAGGCAGAATTTGCGGAGTTCCAGGCGAGCCATCATTTCCCTCGAGAAAAGATTGGATTTGCCAGT
PROTEIN sequence
Length: 745
VTGILLAAWGISRFNIARPAVCDLVWRSSLILIVLAPGVVVCRAMVVDWQWKIPVWPAEIVVSTDLGTTSGQVSNPRTILSHPRENHHALTPSLASQTVAKNSPSVLAEEEPAVLAADPLPATPRDMPGEPLPGSMPDWSWSSVVFAVWSLGAAFHLITIGISARNGNRLRRAAKLVTDAECLALHRECVNRVGLHFVPPVSVNSDLSSPVVVGMFYPQIVIPPSLLRTDGQQDLKAVLLHECGHLKRNDLVFDLVLRFALAIFWPHPLVYVLAREIRRLREEMCDNFVLVQESAVQYAETLLRVAVGKRLNEAMLLGIGVFSKSHRLEQRVASLLSPSRRIETSAPRRTQFLIVGVASGVLFAGFSIRLTSVGAAPPRSVVSTAEVLEVADDGPAESVAAAAPGEGDKSIDAAFEKAVAAAAAKPIVIQFRVVDMQGRPIVGAHVLPGGVSDFHGASWAGDKGLWQVVESDDEGFVRFPLPLDVLKQAIVMQILNGDSSGTSSIWGNDLYPVPEGFPTELKKLGIRQLYLRVDHPDHPLSSNYVELKHDAQIQLADSVTIVARGRRAGEAGLAQRVVPRLTSSHSTDWDEDAGFVTYRRVNLTDLKSCPCFQLIQFPEQGGAWFSDIVDLKHLAGNPVSLDLTLKRGVRLAGRLADDVPRPVKNGIVFGKMVHLVGDDSQGTAWSVKTAVDEDGTFVMESLPFHQTLQLIALCDGWNSRSPSQAEFAEFQASHHFPREKIGFAS