ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_88408_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(5525..6952)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A2ED9 similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 435.0
  • Bit_score: 847
  • Evalue 4.70e-243
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 422.0
  • Bit_score: 298
  • Evalue 3.00e-78
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:EMI23237.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.3
  • Coverage: 431.0
  • Bit_score: 298
  • Evalue 1.20e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopirellula europaea → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1428
ATGAGATTTCAGGCACAGGCAATAAACTTCAACGAAATCTTCGTCAGAACCGATGGACCCATCACGATCCTCATATCCGTTGTCTCGGAAAGGGCTCTCGCAGTGGTTCGATCCCGCATAATCCTCTTCTGTTGTCTGGTCGCGTTCGCGAATGTCGCTCCTGTCAGAGCCCAGTACGGTGCTCAAATGACCAGTGTAGGGGCCATCAACCGATCGATGGGGGGCACGTCGACGGCGGCTCCGCTCGATACCTTGGGGGCGTTCCTTTGGAATCCTGCCACCATTACGGCGCTCCCCAATTCAGCGGATATGTCCGTTGAATTGATGTTGCCACACTCAAAGTTGTCGTCGTCTGTCGCGCCTGGCGCGTTTGGGCCTGGAACCCCACCAATTGGTTTTTCAGGCTCGGACAACAGCAACAGCGGCGTCTTCCCACTGCCCAATTTGGGTCTCGTTTACCAACCTGAGGGTGTGTTGGATTACGGGGGCCACGAAATGCCGGTTTCGTTCGGGCTTGGCGTTTTGACAGTTGGCGGATTTGGCAGCAATTTTCCGGGCAGCAATTCAAACCCGATCCTCATGCAACCGCCGCTAGGGGTGGGACCGATCTTCGCCCAGTACGTTCTCACGCAAATTGTGCCGACAGTAGCACTCCAGGATACTGAGAAATTATCGATTGGTATCTCGCCGATGATCGACCTCGCGAACCTGAGCGTCGATCCAGCCATCCTCTCCGCACCGGATCCATCAGGGGGCGGTGCCGTGTACCCTCCTGCCACGCACGGCACATACCAGTGGGGCGCTGGAGTTCAAGGCGGTGTTTACTATACCACGGATAATTGCTGGCAGTTCGGTGCGTCGCTGAAAAGCCCTCAATGGTTCAACGCGTTTCAGTTCAATTCGCATGATCCCACGGGAGCGCCTCGTGACGTCAAGATGCTGGTCAACGCACCGATGATTGCGTCGATCGGCACGGCTTACAGCGGCTTTGAAAAGTGGTTGCTGGCTCTGGATCTGCGTTACCTGGACTATGCGAACACAGCCCCCTTTGCCGCTTCCGGGGTGTCACAGAATGGCGCGGTCAACGGGCTGGGTTGGAACAGCATTTTTGCCGTGTCGACCGGGGCACAATACCAGCTGTCCGAGATGTTCTCTCTGCGGGGCGGATACTCGTTTAACACGAACCCAATCAACAGTGATAACACCTTCGTGAACGTGGCAACGCCACTCGATATCCAGCATGGGATCTACTTTGGTGGCTCGGCCAACGTGACTCCGCGATTTAAGATCTCGCTGGCCTACGCTCACTTCTTCGCCAATACGATCAGCGGTGCCTGGGTCAGCCCACTTGGTCCAATTCCTGGAACCAACGTGACTGCAACCAGCTCTGCCGATTCCGTCATCGCGACCGCCAGCTTCTTGTTCTAA
PROTEIN sequence
Length: 476
MRFQAQAINFNEIFVRTDGPITILISVVSERALAVVRSRIILFCCLVAFANVAPVRAQYGAQMTSVGAINRSMGGTSTAAPLDTLGAFLWNPATITALPNSADMSVELMLPHSKLSSSVAPGAFGPGTPPIGFSGSDNSNSGVFPLPNLGLVYQPEGVLDYGGHEMPVSFGLGVLTVGGFGSNFPGSNSNPILMQPPLGVGPIFAQYVLTQIVPTVALQDTEKLSIGISPMIDLANLSVDPAILSAPDPSGGGAVYPPATHGTYQWGAGVQGGVYYTTDNCWQFGASLKSPQWFNAFQFNSHDPTGAPRDVKMLVNAPMIASIGTAYSGFEKWLLALDLRYLDYANTAPFAASGVSQNGAVNGLGWNSIFAVSTGAQYQLSEMFSLRGGYSFNTNPINSDNTFVNVATPLDIQHGIYFGGSANVTPRFKISLAYAHFFANTISGAWVSPLGPIPGTNVTATSSADSVIATASFLF*