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2019_SCN_bioreactor_t3_planktonic_scaffold_99152_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(1752..2267)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Schlesneria paludicola RepID=UPI00029AB908 similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 171.0
  • Bit_score: 295
  • Evalue 1.90e-77
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 159.0
  • Bit_score: 106
  • Evalue 4.70e-21
Tax=RBG_13_Planctomycetes_63_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 158.0
  • Bit_score: 125
  • Evalue 4.80e-26

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Taxonomy

RBG_13_Planctomycetes_63_9_curated → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 516
ATGATGAACTGGTTCAGTGGGGCGAAGGTCACGCAACTGCTCAATGAGCAGTTTGCCGCGCTCTCACTGTTCGCCTCGCAATGGACCGACTCCGCCGAAGATTGCGTCCAAGAAGCAGTCCTTGAGCTCGCTCGCCAAACATCTCCGCCGGACAACATTGTCGCGTGGCTGTTTCACGTGGTTCGGCGACGGGCCATGACGGCTCATCGATCCTCGTCGCGACGGCGCAGGCACGAAGCGATGGCGGCACGCCTGGTTCGTGTCTCCAACGAGCGAAACGACAGCGATTTTGACATAGAGGAACTTTTGATCGCACTGGATGAACTGGGTGACGACGAACGAGAAGTCATTGTCGCTCGAATGTGGGGTGGACTGGGATATGCCGAGATCGCCATATCGCTCGAGATTTCGACGGCGACTGCGTTTCGCCGATTTGAATCAGGATTGAAAAACCTGAAAGCACGATTGGAAGCCCGATGCAACAAGACGAATCCTTCAAACTGCCGGACGACCTGA
PROTEIN sequence
Length: 172
MMNWFSGAKVTQLLNEQFAALSLFASQWTDSAEDCVQEAVLELARQTSPPDNIVAWLFHVVRRRAMTAHRSSSRRRRHEAMAARLVRVSNERNDSDFDIEELLIALDELGDDEREVIVARMWGGLGYAEIAISLEISTATAFRRFESGLKNLKARLEARCNKTNPSNCRTT*