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2019_SCN_bioreactor_t3_planktonic_scaffold_59406_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 566..1921

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha n=1 Tax=Schlesneria paludicola RepID=UPI00029A996A similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 451.0
  • Bit_score: 872
  • Evalue 1.70e-250
RNA polymerase subunit alpha domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 452.0
  • Bit_score: 640
  • Evalue 2.40e-181
RNA polymerase alpha subunit domain protein {ECO:0000313|EMBL:ADG66450.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 452.0
  • Bit_score: 640
  • Evalue 1.20e-180

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1356
GTGATCAAGACGGCCGAACCAGTTAACATTCGTGGAATTCTGCAAACCAAGGGACAAATGACGGCTGACGAGTTCAGCCAGTTGCGAAGGGCAGTCGCGTCTGACCAAGTCGTCTCTGCGCGTCAAGAAATTGAAGCGATCCTGCGCGATGTAGAAAGCGGTGCCGCCTCGGGACAGGGCGCTCGAGCCGGGATCGGCGCTTATCTGCTGGGCCAGCACGCCATTGCCGAGCGATTGTTGGCTGGTGCGGGCAGTGATGGCGTCGCCATGTACGTGCTCGGGATGGTCTATCTCTCGCTCGAACAGTGGACGGAAGCGGAAGAAAAGTTCTCCGCTGCTGCAAAGGCTGGCTACGACAACGTCGAATGCATCATGAAGCGCGCCGGCGCGATCCGGATGCAAGGTCGGCTGGAAGACGCTGAAACCGCCCTGAAGCAAGCCGGGACCGAAGGCGCTCGTCGTGCGGATTACTCATATCAGATGGGTTGTATCCTTGCCGACCGTGGCGATACCTACGGCGCGATCGAATACTTCGAACGTGCGGTCGATATGGACCCACATCATTCGCAAGCTCTGTTCCGCCTGGCCGGTGAAAACGCACTCTACGGCAACGATAACGAAGCGATTCGCTTGTACGAGCAAGGTCTCAGCAAACCTCCGTTCTATATCGGAGCCTTGTTGAACCTCGGCCTGCTTTACGAAGACAAGGGAAACTATTCGGCCGCCGCATTCTGCTTCCGCCGTGTGCTTCAACACGATCAGAATCATGCCCGTGCGTTGATGTACATGAAGGACATCGAAGCGACGAGCGAAATGTATTACGACGACGACATGGCGAAGAACGAAGCTCGTCTCGAGCAGTTGCTTAGCCGTCCTGTCACCGACTTCGAATTGTCGGTTCGTAGCCGTAACTGCCTTGCAAGCATGAACATTCAAACGCTGGGTGATCTGACGAAGATTACCGAGCCGGATCTGCTGCAAGGTAAGAACTTCGGTGAAACCTCGCTGGTTGAAATTCGCGAACTGATGCAGGCCCACGGATTGCGAATCGGCCAGAATCTGGCTCCTTCCAAGCCAAAGGATGCCGGTGCCTGGCAAGGTGGCGCAGGGACCTACGCGGTGCTGCCTGCCGATTTGTCGCCGCAGGAACAAGCCCTGTTGGCTCGTTCGGTTTCCGATCTGAACCTGTCCGTTCGTGCTCGCAAGTGTATGGCTCGTTTGCAGATTACGACTCTTGCCGAGTTGGTTCAGCGAACTCCAGACGAATTGCTGGCAACAAAGAACTTCGGTGTGACGTCGCTAAACGAAATTCGCCAGCAATTGGGCGAAATCAATCTGAAGCTGCGAAACGACTGA
PROTEIN sequence
Length: 452
VIKTAEPVNIRGILQTKGQMTADEFSQLRRAVASDQVVSARQEIEAILRDVESGAASGQGARAGIGAYLLGQHAIAERLLAGAGSDGVAMYVLGMVYLSLEQWTEAEEKFSAAAKAGYDNVECIMKRAGAIRMQGRLEDAETALKQAGTEGARRADYSYQMGCILADRGDTYGAIEYFERAVDMDPHHSQALFRLAGENALYGNDNEAIRLYEQGLSKPPFYIGALLNLGLLYEDKGNYSAAAFCFRRVLQHDQNHARALMYMKDIEATSEMYYDDDMAKNEARLEQLLSRPVTDFELSVRSRNCLASMNIQTLGDLTKITEPDLLQGKNFGETSLVEIRELMQAHGLRIGQNLAPSKPKDAGAWQGGAGTYAVLPADLSPQEQALLARSVSDLNLSVRARKCMARLQITTLAELVQRTPDELLATKNFGVTSLNEIRQQLGEINLKLRND*