ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_89758_9

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(8048..8497)

Top 3 Functional Annotations

Value Algorithm Source
MarR family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029AA213 similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 115.0
  • Bit_score: 206
  • Evalue 1.70e-50
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 135.0
  • Bit_score: 134
  • Evalue 1.80e-29
MarR family transcriptional regulator {ECO:0000313|EMBL:AIA30649.1}; TaxID=1441628 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum YSK.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 135.0
  • Bit_score: 134
  • Evalue 9.00e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leptospirillum ferriphilum → Leptospirillum → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 450
ATGACGAATCCGACGCCATCCGCTGTTCGCACCCCGTGCCTTTGCCACGCACTGCGTAAGGCGTCGCGCGCGGTCAGCCGCGTCTACGACGACGAGATGCGTTCGGTCGGGTTACGTACCACGCAATTCTCACTACTCGTTTACCTCAGTCGAATTGGCGAGGTTCGACAGGGTGATCTCGGTGAGTTGATGTTGCTTGAAGACACAACGGTCACTCGCAATGTCCGCCCGCTGCTGAACAGTGGCTGGGTTACGATCCGGCCCGGGACTGACCGTCGCGAAAAGCTGGTGGCGATCACGGACGCGGGTCGTACCAAGCTTGTTGAAGCACAACCGGCTTGGACACGTGCGCAGAATCGATTGAAGTCCGTACTTCCCGAGGGTCAGTGGCACAATCTGCTGAATGTGTTGCCGGACGTGGTACAGGCAGCCGCCAACCTCGATCTGTAA
PROTEIN sequence
Length: 150
MTNPTPSAVRTPCLCHALRKASRAVSRVYDDEMRSVGLRTTQFSLLVYLSRIGEVRQGDLGELMLLEDTTVTRNVRPLLNSGWVTIRPGTDRREKLVAITDAGRTKLVEAQPAWTRAQNRLKSVLPEGQWHNLLNVLPDVVQAAANLDL*