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2019_SCN_bioreactor_t3_planktonic_scaffold_92381_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 1170..2930

Top 3 Functional Annotations

Value Algorithm Source
single-stranded DNA exonuclease n=1 Tax=Schlesneria paludicola RepID=UPI00029A56D9 similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 586.0
  • Bit_score: 1133
  • Evalue 0.0
single-stranded-DNA-specific exonuclease RecJ similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 577.0
  • Bit_score: 715
  • Evalue 9.80e-204
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:ADG66521.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 577.0
  • Bit_score: 715
  • Evalue 4.90e-203

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1761
ATGCATCGAACCTGGCGAATCGCGACGCACGATCGTGCGTACGTGAAGGATCTAAGTGTTCGTTTGAAGGTCACGGCGCTGATTGCGCAGGTTTTGGTGGCACGTGGGCATCAACGGCTGGAATCGGCCGAAAATTATCTTTCCAAAAAGCTAACAACGCTGCATGACCCCGAAACGCTACCGGGACTGAGCGCTGCCGCCGACCGGATTGTGGCCGCTGTTCAATCCAAACGGCGGATCACCATTTACGGTGACTACGACGTTGACGGCGTCACGTCGACCAGCCTGCTATGGCACTGCTTGCAGCTGTGCGGAGCCAAGGTCGACTACTATATTCCCTCGCGCATGGAAGAAGGATACGGCCTCAATTGCGATGCCATTCGGCAACTTCATTCCGAAGATCCAACACGACTGCTTGTCAGCGTCGATTGCGGAATCACCAGTTGCACCGAAGCGGCACTCGCGCGGGAACTTGGTCTTGAGCTGATCATCACAGATCACCATACGCCTGCCGAGAAATTGCCGGACGCCGATGTGCTCGTCCACCCACGGCTTCCTGGCAGCTATCCCTTCGGTGAACTCTGCGGAGTGGGTGTCGCCTTTAAGCTGGCGTGGGCGATCTGTGCACGGATGGGGGATGGCAAGCGCGCGTCACCGCGGATGCGAGAGTTTCTCTTGAGTGCCATCGGACTCGCCGCGATCGGAACAATTGCCGACGTCGTACCCCTGATTGACGAGAACCGAGTGCTGGTGCACTTTGGTTTGGCGAGCCTTTTGGATCGCGCCAACCCGGGACTGCAGGAACTGCTGCGAGTCGCAAAAGTCGCGGACAAAGGCACGCTGCAGGCGGAAGATATTGCGTTTGCCGTGGCACCGCGGATCAATGCCGCCGGTCGCCTGGGGCAAGCTCGATTGGCTGTTGAGTTGCTGACGACCAGCGATCGCGAGCGAGCGGTCGCACTGGCAACGTATCTTGATGGACTCAACAAGGACCGACAGTCGGTCGAGCGGAAGATGCTGAAGCAGGCGAAGGAACTCGTCGAAGAGAATGCCGAATGGGCCGAGCATCGCGCACTGGTGCTTTCGCATTGCGAATGGCATCCGGGGGTGATCGGCATCGTGGCCACTCGAGTTGCCGAGCATTTTCAGCGTCCGACGATCATGATTGCACTCGGTGGTTTGAACGGATTCGCACAGGGATCGGGACGCTCGTTTGCCGGTTTCAATCTGCATTCAGGTTTGCTTGCGTGCCGGGATCATCTCGAAACCTTTGGTGGTCATCACGCCGCGGCGGGGCTGAAGATTCGCGTCGATGGAATTGATGCATTCCGCGAGGCGTTTGTGGCTCATGTCCGTGAGAATCATGTGGCGGCGGCGGGAGCCACCGAACTGCAGATTGATTCAGAAGTCACGCTCAGTGATCTGACGATACGTTCGGTGACGGAGCTGGAACGCCTGGGGCCATTTGGAGCCGCCAATCCCCGGCCGATTTTTGTCGCATCCAACGTGGAGCTGGCGTCACCGCCGAAAAAGATGGGGGAAGGTGAAAGACACCTTTCGATCTTCGTCAAGCAGTATGGTCAGAAGATGCGCGGCGTCGCCTTTGGCAAAGGTGAATGGGCGGACGAGATCGCGGAGCATGGTGGTCCGATTTCGATCTGCTTTCAACCGACGATCAACCGCTTTCAGGGGCGTGAAAGTGTTGAGTTCCATCTGATCGACTGGCAGCCTGAGCATGCCGCCGCGGGCGTTGCCGTTTGA
PROTEIN sequence
Length: 587
MHRTWRIATHDRAYVKDLSVRLKVTALIAQVLVARGHQRLESAENYLSKKLTTLHDPETLPGLSAAADRIVAAVQSKRRITIYGDYDVDGVTSTSLLWHCLQLCGAKVDYYIPSRMEEGYGLNCDAIRQLHSEDPTRLLVSVDCGITSCTEAALARELGLELIITDHHTPAEKLPDADVLVHPRLPGSYPFGELCGVGVAFKLAWAICARMGDGKRASPRMREFLLSAIGLAAIGTIADVVPLIDENRVLVHFGLASLLDRANPGLQELLRVAKVADKGTLQAEDIAFAVAPRINAAGRLGQARLAVELLTTSDRERAVALATYLDGLNKDRQSVERKMLKQAKELVEENAEWAEHRALVLSHCEWHPGVIGIVATRVAEHFQRPTIMIALGGLNGFAQGSGRSFAGFNLHSGLLACRDHLETFGGHHAAAGLKIRVDGIDAFREAFVAHVRENHVAAAGATELQIDSEVTLSDLTIRSVTELERLGPFGAANPRPIFVASNVELASPPKKMGEGERHLSIFVKQYGQKMRGVAFGKGEWADEIAEHGGPISICFQPTINRFQGRESVEFHLIDWQPEHAAAGVAV*