ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

2019_SCN_bioreactor_t3_planktonic_scaffold_85054_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(1930..2736)

Top 3 Functional Annotations

Value Algorithm Source
sodium:proton antiporter n=1 Tax=Schlesneria paludicola RepID=UPI000299F442 similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 268.0
  • Bit_score: 484
  • Evalue 4.60e-134
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 268.0
  • Bit_score: 297
  • Evalue 2.90e-78
Uncharacterized protein {ECO:0000313|EMBL:ADG69178.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 268.0
  • Bit_score: 297
  • Evalue 1.40e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 807
TTCGTAAATGGCGTTTTGCTGGTGGTCTTTTACATCTGGGATTCGATTTCGGCTCGAAGCGATACAAAGCCGGTTGTACAGGGGGAAGCTTCGAAAGAATCTCTTTCCGTAGAATCGTTCGGGGTGGAAGGGCGGCACAATTTTCTGGGGTTGGCCGTCATTGTCGCAATCATCTATAGCTGCGGCCAAGGTTATGGAAACGCGGTCTTCAAGCAGTATCTACCTGGCGATGGCGAAGTCTGGCCGTTTGGCGTCCAAGAGCTGATGATGGCTTTGACGACGGGAATTTGCTTCATAATTACTCCCCGCGCCACACGAGAGAAGAATCGATTCGGTTTTGGTCCGATTTTCGAAGTCGCAGTGTTGTTCGCTGGAATTTTCGTCACGATGATCCCGGCCCTGGCGTTGTTAAACGTGCATGGCAAGTCGCTGGGTGTGAATGAACCAGCAGAGTTCTTCTGGGCGACCGGGATTCTGTCTAGCTTTTTGGACAATGCTCCGACCTATCTGACGTTTGCCGCGACAGCGTGTGGCATGTATGGAGTGAATACCGAAGACGGCCGTTACCTGCATCACTTTCTGAACTTGCCTGAAGCGGCACAGACAGCTCAAATTCTGGCGGCAATCTCGTGTGGGGCAGTCTTCATGGGCGCCAATACCTATATCGGAAACGGTCCCAATTTCATGGTGAAAGCCATTGCTGAAGAGAACAACGTCAAGATGCCCGGTTTCTTCGGCTATATGGCGTATTCGATTGGCATTTTGGTTCCGATTTTCATTGCCGTCACGTTTATCTTTTTCCGCTAG
PROTEIN sequence
Length: 269
FVNGVLLVVFYIWDSISARSDTKPVVQGEASKESLSVESFGVEGRHNFLGLAVIVAIIYSCGQGYGNAVFKQYLPGDGEVWPFGVQELMMALTTGICFIITPRATREKNRFGFGPIFEVAVLFAGIFVTMIPALALLNVHGKSLGVNEPAEFFWATGILSSFLDNAPTYLTFAATACGMYGVNTEDGRYLHHFLNLPEAAQTAQILAAISCGAVFMGANTYIGNGPNFMVKAIAEENNVKMPGFFGYMAYSIGILVPIFIAVTFIFFR*