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2019_SCN_bioreactor_t3_planktonic_scaffold_110921_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(2623..3234)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Schlesneria paludicola RepID=UPI000299E695 similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 183.0
  • Bit_score: 335
  • Evalue 3.40e-89
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 174.0
  • Bit_score: 228
  • Evalue 9.60e-58
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ADG66372.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 174.0
  • Bit_score: 228
  • Evalue 4.80e-57

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 612
ATGGCGCCACATCAGAACGTGGTCGCTGCGCAAGCCGATGGGAATTCAGGCGGTAATGTGACAGAACAAATCGCAGATGACGATGGCTCGCGACGAACGCCGGATGGCGAGTTCGTGCAGCTGTTCACGCACCATCAACGACGACTGTTTTTGTACATCTTGTCTCAGCTCGGAAATCCTTCTGATGCGGAAGAGGTCTTGCAAGAAACGAATGTCGTGGTCTGGAGCAAGTATTCACAGTTCCGTCCTGGAACGAATTTTCTCGCTTGGGTCAGCCAGATCGCGAATTTCGAAATCATGAAGCATCGGACGAAGAAACGACGCGAGAAGATCGTGTTCAGCGACGAATTTTTACACGCAGTTGCAAGTACCAGTCTCGAACGGTCTGACGAACTCGAACGTCGGCGGACGGCACTTGCAGACTGTTTGAAGCGACTTAGGCCGAAGGATCGAGAACTGATTGAGCAACGCTACGCACCGGGTGAACGGGGCACCATGTTGGCCGAACAAATCGGTCGTCCGGTGAACTCTGTCTATCAGTCACTGGGGCGCATCCGTCGGGCTCTATTGGAATGCATCGAACGCCAAATGGCACCCGAGGTGTCGCGATGA
PROTEIN sequence
Length: 204
MAPHQNVVAAQADGNSGGNVTEQIADDDGSRRTPDGEFVQLFTHHQRRLFLYILSQLGNPSDAEEVLQETNVVVWSKYSQFRPGTNFLAWVSQIANFEIMKHRTKKRREKIVFSDEFLHAVASTSLERSDELERRRTALADCLKRLRPKDRELIEQRYAPGERGTMLAEQIGRPVNSVYQSLGRIRRALLECIERQMAPEVSR*