ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_111479_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(499..1122)

Top 3 Functional Annotations

Value Algorithm Source
recombinase RecR n=1 Tax=Schlesneria paludicola RepID=UPI00029B1028 similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 207.0
  • Bit_score: 406
  • Evalue 1.20e-110
recombination protein RecR similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 207.0
  • Bit_score: 296
  • Evalue 3.80e-78
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 207.0
  • Bit_score: 296
  • Evalue 1.90e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 624
ATGGCACGGATTGAGGAGCCTCCACGGCATCCTTATGGGGCCGCAGTGGGAAACTTAATCGAACGGCTCGCAACATTGCCGGGGGTTGGACGTAAGTCCGTCGAGCGACTTGCGAATCACCTATTAGACTGCTCTGAAGAGGAAGCCAATTCGTTGGCAGAAGCCATTCGGCGCGTCAAAACGGTCATCCGCCCCTGTTCTGTTTGCTTCAACCTTACTGAAAACGAAGTTTGCAATATTTGCAGCGATTCTCGCCGAGACCATCACTCGGTGTGCGTCGTTGAGCAGCCTCGCGATTTACTTGCGCTCGAGGCTGCATCGATTTTCAATGGGGTTTATCACGTCTTGGGTGGTCGCCTTGCACCCCTCAACGGCGTTGGGCCAGAAGATCTGAATATTGGTGCATTGGTGAAACGTGTTCGGCAGGGAGGGGTTAAGGAGATATTGATGGCGACCAATCCGACCCTGGAAGGGGATGGGACGTCACTCTTCATCTCGAACCTGCTTGCGAACGATCCGGTAAAAATCACGCGACTCGCTCGCGGGATCGCCTCCGGGAGTGTGTTAGAGTTTGCTAATCGTGAAATGTTGGCGGATGCCATTCGAGGAAGACAATCTTTTTAG
PROTEIN sequence
Length: 208
MARIEEPPRHPYGAAVGNLIERLATLPGVGRKSVERLANHLLDCSEEEANSLAEAIRRVKTVIRPCSVCFNLTENEVCNICSDSRRDHHSVCVVEQPRDLLALEAASIFNGVYHVLGGRLAPLNGVGPEDLNIGALVKRVRQGGVKEILMATNPTLEGDGTSLFISNLLANDPVKITRLARGIASGSVLEFANREMLADAIRGRQSF*