ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_98592_5

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(7568..7828)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=1 Tax=Schlesneria paludicola RepID=UPI000299E0E8 similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 86.0
  • Bit_score: 175
  • Evalue 1.50e-41
50S ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 83.0
  • Bit_score: 115
  • Evalue 5.00e-24
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 83.0
  • Bit_score: 115
  • Evalue 2.50e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 261
ATGGGTTCCGAATGCGCGATTTGTCAGAAGAAGCCGGTTCGCGGCAACCAGAAAGTGGAACGCGGTAAGGCCAAGTACTTGGGCGGTAACGGTCGTAAGACGACTGGTATCACCAAGCGATGGTTCCGTCCAAACCTGCAGTCGTTGCGTATGCAGACTGGTGAAACGTCGAAGCGCGTTCGCGTCTGCGTTCAGTGCTTGCGCTCCGGCTTGGTTGTGAAGCGAGTGGTCAAGAAGCCATTCACGATCGACGCTCAGTAA
PROTEIN sequence
Length: 87
MGSECAICQKKPVRGNQKVERGKAKYLGGNGRKTTGITKRWFRPNLQSLRMQTGETSKRVRVCVQCLRSGLVVKRVVKKPFTIDAQ*