ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_102957_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 399..1553

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 330.0
  • Bit_score: 427
  • Evalue 1.70e-116
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A435F similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 357.0
  • Bit_score: 669
  • Evalue 1.90e-189
dihydrouridine synthase DuS similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 330.0
  • Bit_score: 427
  • Evalue 3.50e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pirellula staleyi → Pirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1155
ATGAATGTGAACATACGTGCGCTTTTGCTTGGCATTGCTTGCGACCCTTCCCATCGCAAAGGAACCTGTCAGAATGGGGCGATGACCAACGTGACTTCCATTCAAGACAAGCATCCGCCCCCGATCTGTTCTGAACCTCGCCCAGAATTGGGGTTAGGGACCGTGCGTCCGTTGGCGATTGGGAACGTGAAAATCGGCTTTCCTGTCGTGCAAGCGGCGCTCAGTGGATACAGCGACGGACCAATGCGTATCGTGGCACGGCGGCTTGGAGCCACTTATTCCCTTGCGGAAGTCCTCATCGATCGATTTGTCCTCGACGCCACGAATCAGCACCATGCGCGCCGTCATCTGTCGATTACTGACGAGGAACACCCCGTTGGGGGTCAACTGATGGGATCCAACCCCGTCGAATTCGCTCCGGCGGCACTGCGACTGGTCGATGCAGGGTTTGATGTCATCGATATCAACTTTGGTTGTCCCGTCAAAACAGCTGTCAGCGGATGTCGTGGCGGCTACCATCTCAGTCAACCCGATGTCGCGCTGGAGATTGTGAGCCGTACACGCGATGCCGTTCCGGAATCGATTCCGGTCACCCTGAAAATGCGTCGCGGAATTGATGATTCCGAGGAAAGCCGCGAGCGATTTTTCCGGATTCTGGATGGGGCATTCGCCCGCGGGATTGCTGCGGTCACTGTTCACGGACGCACCGTCGAGCAACGTTATGTTGGTCCCAGCAACTGGGATTTCCTTCGCGAAGTCAAGCAACACGTGGGATCAAAGATCATTTTGGGCAGCGGTGATCTCTTCACGGCACAAGCATGCCTCGAGATGATTCGAGACACGGGTGTCGATGGAGCTTCAGTCGCGCGCGGCGCCATTGGAAATCCTTGGATTTTCGCCCAGGCCAAAGCCCTGTCTGCCGGGTTGCCGCTCCCCGAGCCTGATCTCGCTGAACAACGTCGCGTTCTCGAAATGCACGCCGAACTTTGCCTGAAGGCGTTGGGCGAGAAACAAGCGCACCTCTCGATGCGTATGTTCGGAATCAAGTTCGCACGACTGCATCCCGAGTTCGAGCAGCTTCGAAACGCCTGGGCCATTTGTCGTAGTATGTCTGCCTGGCGCGATGTCTTGCAGCAATGGTATCCATCGAACTGA
PROTEIN sequence
Length: 385
MNVNIRALLLGIACDPSHRKGTCQNGAMTNVTSIQDKHPPPICSEPRPELGLGTVRPLAIGNVKIGFPVVQAALSGYSDGPMRIVARRLGATYSLAEVLIDRFVLDATNQHHARRHLSITDEEHPVGGQLMGSNPVEFAPAALRLVDAGFDVIDINFGCPVKTAVSGCRGGYHLSQPDVALEIVSRTRDAVPESIPVTLKMRRGIDDSEESRERFFRILDGAFARGIAAVTVHGRTVEQRYVGPSNWDFLREVKQHVGSKIILGSGDLFTAQACLEMIRDTGVDGASVARGAIGNPWIFAQAKALSAGLPLPEPDLAEQRRVLEMHAELCLKALGEKQAHLSMRMFGIKFARLHPEFEQLRNAWAICRSMSAWRDVLQQWYPSN*