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2019_SCN_bioreactor_t3_planktonic_scaffold_111762_9

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(13273..13698)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Schlesneria paludicola RepID=UPI00029A7D20 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 141.0
  • Bit_score: 256
  • Evalue 1.10e-65
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 148.0
  • Bit_score: 90
  • Evalue 2.20e-16
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADY59969.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 148.0
  • Bit_score: 90
  • Evalue 1.10e-15

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Taxonomy

Rubinisphaera brasiliensis → Rubinisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 426
ATGATTCGCCTTTGGAAATCTCTTGAATCTGTCGGCCCCACAACGGTCGAAGAATTCATGGGACTAGCAGCCCTGCAGATCCGCCGGGCGCTCAGTGACATGGTCCGCAATCATTTTGGACGAAATCACGACGCAGCGGTCTACCCTCTCTCAGTCACAGATTCCCAAAGCGGCCCTGTCGGGGTTGTGGCGGATGACTCCGACATGACTCCAGAAGATCTGATGCGATGGACGGAATTTCATGCTGCCGTCGATCAACTGGAAGAACCAGACCGAACTGCGTTCGACCTCTTGTACTATCATGAACTGCCTCAATCCGAGGTGGCAGAATTGATGAAAGTCTCGGATCGGCAGGTTCGGCGATATTGGCTGTCCGCACGCCGCACCCTCCTCAAGGTGCTGGATGGATCGTGGCCCAAGCTGTAG
PROTEIN sequence
Length: 142
MIRLWKSLESVGPTTVEEFMGLAALQIRRALSDMVRNHFGRNHDAAVYPLSVTDSQSGPVGVVADDSDMTPEDLMRWTEFHAAVDQLEEPDRTAFDLLYYHELPQSEVAELMKVSDRQVRRYWLSARRTLLKVLDGSWPKL*