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2019_SCN_bioreactor_t3_planktonic_scaffold_113030_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 3..1112

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor, RpoN n=1 Tax=Schlesneria paludicola RepID=UPI00029AD711 similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 369.0
  • Bit_score: 728
  • Evalue 1.90e-207
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 370.0
  • Bit_score: 545
  • Evalue 8.50e-153
RNA polymerase sigma-54 factor, RpoN {ECO:0000313|EMBL:ADG66542.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 370.0
  • Bit_score: 545
  • Evalue 4.20e-152

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1110
CGTCAGCACGACATGATCTCGAATATCGCGATTCGTCCGCAATCGCTGAACGACTACTTGCTTGAACAGTTCGGCTTCTTCAGCGTTCCCGTCGAAGTGCGCGAATTCGGGCAATTCCTCATCCAGAACTTGGACCACAACGGCCGCTTGCCGGGGAGTTTGCCTGATCTAATCCAGGTTTATGGAAAGTCGATCGCAGACGTCGACGCACAAGCCGCTCTGCAGTTGATTCAGCGATTGGATCCACCAGGCTGTGGCGCACGCGATGCAAAAGAATGCCTTCTGCTACAACTGCGCGACGAAGCACCGTATCGAGACGTGCTCGCAACGCTGATCGCTTCTCACCTTGAGGATCTGGCCCAGAATCGCCTGCCTTTGATTGAACGCAAAACGGGATACTCGATCGAGACGATCAAAGCTGCGTACGAAGAGCTACGTCACATGAATCCGTTTCCTGGACGAGGCTTCGAAGCGCGTCCAGCTCAGGCTGTCAAGCCGGATGTGTTCGTTGAACAGAACGGGGATGACAAATGGATCGTGAGGGTGATGGATGAATACACTCCTCGGTTGCGTATCAGCAAGCGGTATCAGCAGATCCTTCGCGATGGGGCCGATCCCAAGACCAAGGAATATATCAAGCGGAAGATCGATTCCGCCAAATGGTTGATCGAGAGCATTGAACAACGTCACAACACGCTAAAGCGCGTCGCACAGTCGATCGTCGATAAACAGACCGCATTTCTCGAGTTTGGCCCTGAAGCGATCGTGCCGCTCAAGATGCAAGAGATCGCCGACGTGGTGAAAGTCCACGTGACGACGGTTTCCCGCGCCGTCGATGACAAGTGGATACAAACGCCTCGTGGCCTATATCCGCTGAAGCGATTCTTCGGTGGGGGGACCGTGACAGAAAGCGGCGAAGAAGTCGCTTGGGACATCATTCGCATCAAACTGAAAGAGATTGTCGACAAAGAGGATAAGAACGACCCGCTGAGCGATGATGCGCTCGTCGATGAATTACAGAAATTCGGCTACAACCTGGCCCGTCGGACTGTGACGAAGTACAGAAAAGCTCTGGACATTCCCTCATCTCGTCAACGGCGTGCCTACTGA
PROTEIN sequence
Length: 370
RQHDMISNIAIRPQSLNDYLLEQFGFFSVPVEVREFGQFLIQNLDHNGRLPGSLPDLIQVYGKSIADVDAQAALQLIQRLDPPGCGARDAKECLLLQLRDEAPYRDVLATLIASHLEDLAQNRLPLIERKTGYSIETIKAAYEELRHMNPFPGRGFEARPAQAVKPDVFVEQNGDDKWIVRVMDEYTPRLRISKRYQQILRDGADPKTKEYIKRKIDSAKWLIESIEQRHNTLKRVAQSIVDKQTAFLEFGPEAIVPLKMQEIADVVKVHVTTVSRAVDDKWIQTPRGLYPLKRFFGGGTVTESGEEVAWDIIRIKLKEIVDKEDKNDPLSDDALVDELQKFGYNLARRTVTKYRKALDIPSSRQRRAY*