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2019_SCN_bioreactor_t3_planktonic_scaffold_123273_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 2..466

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Schlesneria paludicola RepID=UPI00029B4CD0 similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 154.0
  • Bit_score: 272
  • Evalue 1.60e-70
exporter of the RND superfamily protein-like protein similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 150.0
  • Bit_score: 190
  • Evalue 2.20e-46
Exporter of the RND superfamily protein-like protein {ECO:0000313|EMBL:ADG66864.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 150.0
  • Bit_score: 190
  • Evalue 1.10e-45

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 465
ATGCCAGTCGATATCGGCATGATGATGACGGGCAGTATCGCACTGGGAATTTCGGTCGACTGTACCTTCCATTTCCTTGTGAAGTATCAGGCTGCATATCGACATGGAGCCTCACCGACCGAAGCGGTGTGCCAATCGCTTGAGCATTCCGGTGAGCCGATGTTGGATTCCACTCTGATTTCGGCCTTGGGAATGATGGCACTATGCCTGAGCAGTTTTGCACCAACAGCTCGCTTCGGCTGTCTGATGGCTGCACAAATGTTGGCATCATTGCTTGGTGAACTGGTATTGCTGCCCGCAATGCTGAGCTGCCGCCCTGCTGGACGCATGAAATCGGGCACCGGGAAGTCAGGATCGTCCCGGACAACAGGTTCGAACAATTCCGATGCAGAACTCGAGCCCGAAATTCACCCATTCCCCGCTGAAGTTCCTTCGGTTCCCCGTCGAATTCGAACCGCTCAGTAG
PROTEIN sequence
Length: 155
MPVDIGMMMTGSIALGISVDCTFHFLVKYQAAYRHGASPTEAVCQSLEHSGEPMLDSTLISALGMMALCLSSFAPTARFGCLMAAQMLASLLGELVLLPAMLSCRPAGRMKSGTGKSGSSRTTGSNNSDAELEPEIHPFPAEVPSVPRRIRTAQ*