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2019_SCN_bioreactor_t3_planktonic_scaffold_123348_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(526..1914)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 470.0
  • Bit_score: 399
  • Evalue 4.70e-108
tRNA modification GTPase TrmE n=1 Tax=Schlesneria paludicola RepID=UPI00029A77D6 similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 462.0
  • Bit_score: 783
  • Evalue 6.30e-224
small GTP-binding protein similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 470.0
  • Bit_score: 399
  • Evalue 9.40e-109

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1389
ATGGATCTGAATGTTGACGAACCGATCGCCGCATTGGCATCACCGCCAGGCGGCTCGTCGCGCGGGATCATCCGCATTTCTGGAGGCAACGTTCAATCAGTCGTCAGCAAATGGTTCGAGCCCGACGACGTGACCGCGTGGATGGATGCGAAGTCTGCTCGATCCCATTCTGGACGTTTGGTGCTGAACGGACTTGAAAGACCGCTTCGTTGTCCGGTCCAGGCTCTGTACTGGCCAACCCGACGCAGTTATACGGGACAACCGCTGATCGAACTTCATCTGCCGGGGGCCCCCTCGCTTCTTGAAGAGACGCTGCAAACGGCATTTCGACACGGATCAAGACCTGCACGACCGGGTGAGTTCACGCTGCGAGCGTTTCTTGCGGGAAAACTTGATCTTCTTCAGGCAGAAGCCGTTCTGGGGGTCATTGATGCCCGAAATCATGAGGAACTGCAGACGGCGTTAGGGCAATTGGCTGGCGGCGTATCGGGCCGCCTTTCCACCCTCCGTCGAGATCTGATTGAGCTCTTGGCCGACCTGGAAGCAGGGCTCGATTTTATTGAGGAAGACATTGAATTCGTGAGCCGAGCTGAAGTCGTCGCGAGGCTGAGCGATGCATTCGTGTTTGTGCAGAACCTCGTAACTCAAACTCGCGAGCGGATGGTTTCGCATGTGCGGCCACGAGTTGTTCTCGCTGGCTTGCCTAATGCGGGCAAGAGCACGCTCTTCAATTGTCTGATTGATCGCGAATTGGCGATCGTGTCGCCAGAACAGGGAACAACGCGAGACTTCCTGGTACGAGCCGTCGAATGGAACGACTTGTCGTTCGATCTCGTTGATACGGCTGGCTGGGAAGATTCTGGCGAGGGGATTGGCGCCGCAGCGCAGCTTCATCGAGTCACTCAGTTGAAGCAATCAGACCTGTTGATCTGGTGTACGTCGAGCAGTTTGTCCGACGATGAACGCCAGCAGGATGACGCGCTGTACGTGGCGGCAACTGCTCAAGCACGTGTAACACTGCGACTGATGACAAAGGTCGACCTGGCGTCGGCAAGCGGATTGGGCGAGCCAGGCAAAAATGGTGTGAGCGCGGTGTCTAAAGTGGGGCTGCTGACCCTAAAAGCTGACATCCAGCGGGCGTTGAGTTCAGATCATGCCGGGCGCAGCGAGTGGCTGGGAATCACTGCGGCGCGGTGTCGTGAAACACTCGACGCGATCTTGGCGGCGCTGAGCCGAGCTCATTCTGTCGCGCAGGTGAAGGCGTCGGGCGACGAATTGATCGCTGTCGATTTGCGGGACGCGCTCGAACACTTGGGTGTGATCCTGGGGACGATTTATACCGACGATATTCTGGATCGAATCTTCAGCAAATTCTGCATTGGAAAATAA
PROTEIN sequence
Length: 463
MDLNVDEPIAALASPPGGSSRGIIRISGGNVQSVVSKWFEPDDVTAWMDAKSARSHSGRLVLNGLERPLRCPVQALYWPTRRSYTGQPLIELHLPGAPSLLEETLQTAFRHGSRPARPGEFTLRAFLAGKLDLLQAEAVLGVIDARNHEELQTALGQLAGGVSGRLSTLRRDLIELLADLEAGLDFIEEDIEFVSRAEVVARLSDAFVFVQNLVTQTRERMVSHVRPRVVLAGLPNAGKSTLFNCLIDRELAIVSPEQGTTRDFLVRAVEWNDLSFDLVDTAGWEDSGEGIGAAAQLHRVTQLKQSDLLIWCTSSSLSDDERQQDDALYVAATAQARVTLRLMTKVDLASASGLGEPGKNGVSAVSKVGLLTLKADIQRALSSDHAGRSEWLGITAARCRETLDAILAALSRAHSVAQVKASGDELIAVDLRDALEHLGVILGTIYTDDILDRIFSKFCIGK*