ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_120764_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(3..191)

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 63.0
  • Bit_score: 88
  • Evalue 3.10e-15
lysyl-tRNA synthetase n=1 Tax=Schlesneria paludicola RepID=UPI000299D895 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 63.0
  • Bit_score: 131
  • Evalue 2.30e-28
lysyl-tRNA synthetase similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 63.0
  • Bit_score: 88
  • Evalue 6.30e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 189
ATGTCCGAGACGCCAGATCGTTTGGAAGCCGCTCGTTTGGAAAAGCTCGCGAAAATCGAAGCACTGGGGCTCGATCCCTGGGGCCAGCGGTTCGACGGCCATATTCCGATCGCCAAGGCGCGTGATTTGTGCCCGACCGAGAACGGCGTGGACGGTGATACGGTCCGCATCGCCGGCCGAATCATGAAG
PROTEIN sequence
Length: 63
MSETPDRLEAARLEKLAKIEALGLDPWGQRFDGHIPIAKARDLCPTENGVDGDTVRIAGRIMK