ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_118489_5

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(3925..5463)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Schlesneria paludicola RepID=UPI00029AC13C similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 512.0
  • Bit_score: 991
  • Evalue 1.70e-286
Uncharacterized protein {ECO:0000313|EMBL:EDL61251.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 509.0
  • Bit_score: 539
  • Evalue 3.20e-150
signal peptide similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 518.0
  • Bit_score: 377
  • Evalue 5.50e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1539
ATGAGTGACGGCAAGACTGAGGGTATCGCGCCGAATGCACAGCGGCTGCTGTGGGCCGGCTTCATGGCGATTCTCGCCGCGGGTGTCGGATTTTCGATTCGCGGTGGAATCTTGGGCCAGTGGGCCGTGAAGTTCGGATTCACGATGACCGAGCTGGGAAATATTACCGGCGGTGGACTCGTGGGCGCCGGCATCATCATCCTCATCGGTGCTTTCGTCGCCGACAAGGTGGGCTACGGTACGCTGATGGGCGCCGCATTCATTGCACATTTCATTTCGGCCGTTGTGACTTTGGCGGCGGGCTATGCCTATTCCGTCGGCGGAAAAGATGCCGCATACCAGTGCTTGTATTGGGGGATGTTCCTTTTCGCAGTTGGTAATGGAATCTGCGAAGCCGTCGTGAATCCTCTGGTCGCGTCCCTGTTTCCTACGAATAAGACGCACTATCTGAATATTCTTCACGCTGGCTGGCCAGGTGGTTTGATTCTGGGCGGTCTGATGTCGTACTTCATGAATCCAGACTCAGGCCAAGCCGTCGACTGGAAGGTTCAGATGTCAATCTTCCTCGTTCCAGTCGTGCTTTACGGTGTGATGGTTTTGGGTCAAAAGTTTCCCAAGTCGGAAGCCAGCGATGCTGGGGTTAGTTACGGCACGATGATTCTGCAACTCGTCGCGCCTCTGATGCTTCTGCTTTTGGTTCTGCATGCCCTTGTTGGATACGTCGAATTGGGAACCGACTCTTGGATTGGCAAGATTACCGGTTCGATCATGGGAACGAAGCAAGGTGGGTTGCTGCTGTTTGTGTATACGTCCAGCTTGATGTTCGCACTGCGATTCTTCGCCGGTCCGATCGTGCATCGCATTTCGCCTCTGGGGCTGTTGTTTGTTAGCAGTTTGCTTGGCGTTGCTGGTTTGCAACTTCTCGGTGTCGCGAACACCGTTACTCTGTGTGTGGTGGCAGCGACCGTTTACGCCTGCGGAAAGACATTCCTTTGGCCCACCATGTTGGCAGTGGCGTCAGAACGCTTCCCCAAAGGTGGCGCCATCACGATTGGTGCGTTGGGCGGAATTGGAATGCTGTCGGCTGGCTGGCTCGGAGGCCCTGGCATCGGTTTCAAGCAAGACTTCAATGCTTCGAACGAATTGAAGCAAGAAGCACCTGAAGTGTATGAGCGATACAAGTCTGAAGGTGAGAACAGCTTCCTTGGCTTCAAAGTTGTCGGTTTGGACGGCTTGAAGGTGGGGGTCCTCGAAGACAACGGCAAAGAATTGGAACGAGCCAATCAGCTGTTGCGAGATGCGAACAAGCCAGAAGAAAAGTTGACCCCGTGGTGGGCTGATGCGCAAAAGACTGCCGCCGAGGATAAGAAGCTCGTTGATAAGGCCGTCCTCTACGGTGGCCGTCGCGCGCTGCAACTGACGTCGTATGTTCCGTTGACTATGGCAGGGCTCTACTTGTTCTTGATTATTTGCTTCCAGTGCGCAGGTGGCTATAAGGCCGTGCATCTCGCTGGAACGCCAACTCCAGAATCGCACTAA
PROTEIN sequence
Length: 513
MSDGKTEGIAPNAQRLLWAGFMAILAAGVGFSIRGGILGQWAVKFGFTMTELGNITGGGLVGAGIIILIGAFVADKVGYGTLMGAAFIAHFISAVVTLAAGYAYSVGGKDAAYQCLYWGMFLFAVGNGICEAVVNPLVASLFPTNKTHYLNILHAGWPGGLILGGLMSYFMNPDSGQAVDWKVQMSIFLVPVVLYGVMVLGQKFPKSEASDAGVSYGTMILQLVAPLMLLLLVLHALVGYVELGTDSWIGKITGSIMGTKQGGLLLFVYTSSLMFALRFFAGPIVHRISPLGLLFVSSLLGVAGLQLLGVANTVTLCVVAATVYACGKTFLWPTMLAVASERFPKGGAITIGALGGIGMLSAGWLGGPGIGFKQDFNASNELKQEAPEVYERYKSEGENSFLGFKVVGLDGLKVGVLEDNGKELERANQLLRDANKPEEKLTPWWADAQKTAAEDKKLVDKAVLYGGRRALQLTSYVPLTMAGLYLFLIICFQCAGGYKAVHLAGTPTPESH*