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2019_SCN_bioreactor_t3_planktonic_scaffold_107205_5

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(5554..7257)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E n=1 Tax=Schlesneria paludicola RepID=UPI00029A34A0 similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 567.0
  • Bit_score: 1092
  • Evalue 0.0
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 568.0
  • Bit_score: 942
  • Evalue 3.70e-272
Type II secretion system protein E {ECO:0000313|EMBL:ADG66258.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 568.0
  • Bit_score: 942
  • Evalue 1.80e-271

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1704
ATGGCTCAGCGACGGCTCGGTCAAATTCTCGTTGACTTGGGATATCTGACAGAAGATCAGCTGTGGGATATTCTCGAGGCACAGAAGCAGAGCGAAGGTGAGATTCTCGGTCAGGTGGCGATCCGGATGGGATTCGTCACCGACGCACAGGTCACCGAAGCTCTTGCCGAGCAGTGGGGGATGCCGGTCGTCAATTTGAACGAGACGACGATTCCTGCGAAGGCGCTTGAGCTCGTTCCGCAGACGATGGCCGATGTGTACAAGATCGTGCCGATCTCGCTTAAAGATGGCGTGTTGACGGTCGCGATGGCCGATCCGCAGAACCTCGGAGCGCTCGACGATCTCCGCAGTATGCTCGGCGTGGAAGTGCGCGGTGCGGTTTCGAATGCTCGCGATGTGGATGCAGCGATCGCGCGCCAGTATGCGGGCCGTGAGGAAAGCATCGAAGATATTATCAGTGCCCTCGAAGAGGATGCACCAGCGGGTGGCGGACGCAGTGAACGCGTCCACGATTTGTCTCCTGATGGTGACGAAGCGCCAATCCGCAAGCTGCTGAACATGATTCTGCTGCTGGCGATCAAGGATCAGGCGAGTGATATTCACTTCGAGCCATTCGAAGATGAGTTCCGGGTGCGGATCAAAGCCGACGGAATGCTCTACGAACTCGTGCCTCCGCCCCGCCATCTGGCGAACTCGATCGTCTCGCGTATCAAGATTATGTCGGAACTCGACATTGCCGAGCGTCGTCTGCCGCAGGACGGTCGTATCGAGTTGAACGTCGGTGGTCACTCCGTCGACTTGCGAGTGAGCGTGCTGCCCACGCTGTTCGGCGAGTCCGTGGTTATGCGAGTGCTCGACCGAACGGTTGTGCAGTTGGATTTGAACAAGATCGGGATGGACGCGACGACGCTGTCGCGATTCCGTTCCGTCATCACGCGTCCGAACGGCATCGTGCTGGTGACAGGGCCAACGGGTAGCGGTAAGACCACCACGCTGTACTCGGCGCTCAATGAGCTGAACGACATCGAAACGAAAATCATCACGACCGAAGACCCCATCGAGTATGACATCGACGGGTTGCTGCAGGTTCCGGTGAATCCTGATATTCAAGTGACGTTCGCGACGGTGCTGCGCGCGATCCTGCGACATGATCCCGATACGATTCTGGTCGGTGAGATTCGAGACTTTGAAACGGCGGAAGTGGCCATTCAAAGCGCCCTCACGGGGCACTTGGTGTTCAGTACGCTGCACACCAACGATGCTCCGAGTGCCATTACGCGACTGCGCGACATGGGGATCGAACCGTTCTTGATCACGGCGACCGTCGAAGCCGTGCTGGCCCAACGATTGATTCGCCGAATCTGCTCTGAATGTCGTACGCAATTTGAACCGAGCGATGAGTTGCTGATGGAATTGCAGCTGCCGATCGCTCAGGCTCGACAATACAAGTTCTACTACGGCCGTGGTTGTCAGCGTTGCAATAACGCTGGCTACAAGGGGCGTGGGGGAATCTATGAACTGCTCGACGTGACCGACGATATTCGTGACTTGGTCTCGTCAAACGCGAGCGTGGATGACATTCGTGACTTTGCCCGCGGACAGGGAATGACCACCCTGCGCGAGGCCGGACTCAAGCTGATTTTTGATGGTGTGACCACAATTGACGAAGTTGTGCGTGAAACCGTCATGGAAGATGCAGGTTAA
PROTEIN sequence
Length: 568
MAQRRLGQILVDLGYLTEDQLWDILEAQKQSEGEILGQVAIRMGFVTDAQVTEALAEQWGMPVVNLNETTIPAKALELVPQTMADVYKIVPISLKDGVLTVAMADPQNLGALDDLRSMLGVEVRGAVSNARDVDAAIARQYAGREESIEDIISALEEDAPAGGGRSERVHDLSPDGDEAPIRKLLNMILLLAIKDQASDIHFEPFEDEFRVRIKADGMLYELVPPPRHLANSIVSRIKIMSELDIAERRLPQDGRIELNVGGHSVDLRVSVLPTLFGESVVMRVLDRTVVQLDLNKIGMDATTLSRFRSVITRPNGIVLVTGPTGSGKTTTLYSALNELNDIETKIITTEDPIEYDIDGLLQVPVNPDIQVTFATVLRAILRHDPDTILVGEIRDFETAEVAIQSALTGHLVFSTLHTNDAPSAITRLRDMGIEPFLITATVEAVLAQRLIRRICSECRTQFEPSDELLMELQLPIAQARQYKFYYGRGCQRCNNAGYKGRGGIYELLDVTDDIRDLVSSNASVDDIRDFARGQGMTTLREAGLKLIFDGVTTIDEVVRETVMEDAG*