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2019_SCN_bioreactor_t3_planktonic_scaffold_100263_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(1..423)

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 familyRNA polymerase sigma factor n=1 Tax=Schlesneria paludicola RepID=UPI000299F41C similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 141.0
  • Bit_score: 246
  • Evalue 8.40e-63
sigma-70 familyRNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 141.0
  • Bit_score: 79
  • Evalue 5.00e-13
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADV63880.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.3
  • Coverage: 141.0
  • Bit_score: 79
  • Evalue 2.50e-12

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Taxonomy

Isosphaera pallida → Isosphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 423
ATGACCGAAGAAGTAATCGAAGTCATTCAAACCCGGTGGAGTTTGATTCAGCATGCCCATTCCGCGGGAAAACCTGATTCAGTGGGCGAAGCTCGACGATTGCTGGTCTTGCGGTATTCGTCCGCGATTCGCAGGTATCTGGGTGGGATCGTTCGGAATGACGATCTGGCGGATGAGTTATCACAAGAACTGGTGTTGCGATTGATGCGGGGCGACTTTGGCGGGGCCAACCCGTCACTCGGTCGATTCCGCGATTTTTTGAAGATGGCCATCCGGAATGTGGCCAAGTCGGCCTGGCAGAAATCTGAGAGAAGAAAGACGGTTGATGCGGAACTCGATTTGATCGGTGCGGATGACGGAGGTCAAACCGATCTCCAGTGGACCGAGCAATGGCGGAAATCGGTACTCGATCATGCCTGGAAC
PROTEIN sequence
Length: 141
MTEEVIEVIQTRWSLIQHAHSAGKPDSVGEARRLLVLRYSSAIRRYLGGIVRNDDLADELSQELVLRLMRGDFGGANPSLGRFRDFLKMAIRNVAKSAWQKSERRKTVDAELDLIGADDGGQTDLQWTEQWRKSVLDHAWN