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2019_SCN_bioreactor_t3_planktonic_scaffold_101013_8

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 8196..8537

Top 3 Functional Annotations

Value Algorithm Source
ribosomal subunit interface protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B3013 similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 113.0
  • Bit_score: 194
  • Evalue 5.20e-47
Sigma 54 modulation protein / S30EA ribosomal protein similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 111.0
  • Bit_score: 108
  • Evalue 1.10e-21
Sigma 54 modulation protein / S30EA ribosomal protein {ECO:0000313|EMBL:AGA25669.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 111.0
  • Bit_score: 108
  • Evalue 5.20e-21

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 342
ATGAAGGTTCAAGTCAGTACGGACAATCGAGTCGATGGGTCGACTGCTCTCGTTTCTGAGGTCACCAAGATGGTCGAGTCCTCCTTGGCGAGATACCAGGAACGACTCACGCGCGTCGAACTCCACTTGAGTGACGTGAACGGCCCCAAAGGTGGCGTAGACCATCGTTGCTCGCTTGAGGCTCGCCCCGCCGGTCTCGATCCCGTGGCAGTCACCCACACGGCAGAAACCCCATACGAAGCGGCGAAAGGAGCGGTCGAAAAGATGCACCGACTCCTGACATCGACATTTGGTCGACATGACGCCACCAAGGGCCCGTCAGCCAGTGGTTTGCCGACATAA
PROTEIN sequence
Length: 114
MKVQVSTDNRVDGSTALVSEVTKMVESSLARYQERLTRVELHLSDVNGPKGGVDHRCSLEARPAGLDPVAVTHTAETPYEAAKGAVEKMHRLLTSTFGRHDATKGPSASGLPT*