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2019_SCN_bioreactor_t3_planktonic_scaffold_101422_5

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(3411..3698)

Top 3 Functional Annotations

Value Algorithm Source
biopolymertransporter ExbD/TolR n=1 Tax=Schlesneria paludicola RepID=UPI000299DE2B similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 95.0
  • Bit_score: 174
  • Evalue 2.70e-41
biopolymertransporter ExbD/TolR similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 82.0
  • Bit_score: 63
  • Evalue 1.90e-08
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ADG69572.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 82.0
  • Bit_score: 63
  • Evalue 9.50e-08

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 288
AACGATCGCGGTGATGTGGCCGAAATCAAAATCGAATCGAATTCCGTGATTGAAGGTCGTCTCGACGAATCCAAAGTTCTGCGACTGGACAAGCAATTGCAGTCCACGTTCGCCGTCCAGCAGATTCCCTACGATCGAGTTCAAATCGCCGTGGACGGTCGACTGCGTTATGGCGAATTGATGCGAATCATCGATGTCTGCCACAAACAGCATTTACCTGATGGGACCTTGATGCAGCGCATCAGCTTCACGGAAGTCGATGCGGGTCCGGCGGCTGAATCAAAGTAA
PROTEIN sequence
Length: 96
NDRGDVAEIKIESNSVIEGRLDESKVLRLDKQLQSTFAVQQIPYDRVQIAVDGRLRYGELMRIIDVCHKQHLPDGTLMQRISFTEVDAGPAAESK*