ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_131005_5

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(4068..4487)

Top 3 Functional Annotations

Value Algorithm Source
biopolymertransporter ExbD/TolR n=1 Tax=Schlesneria paludicola RepID=UPI00029A9582 similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 139.0
  • Bit_score: 267
  • Evalue 5.90e-69
biopolymertransporter ExbD/TolR similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 137.0
  • Bit_score: 157
  • Evalue 1.90e-36
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ADG67294.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 137.0
  • Bit_score: 157
  • Evalue 9.30e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 420
ATGCCTCTAAAAACGGAACCGCTGGAAGAACCTTCGATCAATCTCACGTCGATGCTCGACGTTGTGATGCTTCTGATCGTGTTCTTTATGGTGGGGACGAAGTTCTCGGAAGAAGAACGTCAAACTGCAATTCAGGTTCCTTCGGTCTCTGACAATCTTGCGATGTCGGGGCAGCCGAATGAAATCATCGTCAATGTCACCGCAGACGGGAAAGTCAGTGTCCGCTCGGAAAGTCATACGCTTGATTCGCTGAAATCGATGCTTGAGGCGGCTCGCCAGACGTTTCCTGGGCAAGGTGTCATTATTCGCGGCGACGGCCGTGGAAACTATCAGTACGTGATGGACGTCCTTTCAACTTGTAAGGCCGCCGGAATTCGCAGTGTCTCATTGGCATATTCCCCGAATGCGAAAGGGATCTGA
PROTEIN sequence
Length: 140
MPLKTEPLEEPSINLTSMLDVVMLLIVFFMVGTKFSEEERQTAIQVPSVSDNLAMSGQPNEIIVNVTADGKVSVRSESHTLDSLKSMLEAARQTFPGQGVIIRGDGRGNYQYVMDVLSTCKAAGIRSVSLAYSPNAKGI*