ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_122252_7

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 5450..6523

Top 3 Functional Annotations

Value Algorithm Source
ApbE family lipoprotein n=1 Tax=Schlesneria paludicola RepID=UPI00029AC2A2 similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 360.0
  • Bit_score: 650
  • Evalue 6.40e-184
ApbE family lipoprotein similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 348.0
  • Bit_score: 359
  • Evalue 6.40e-97
ApbE family lipoprotein {ECO:0000313|EMBL:ADG69579.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 348.0
  • Bit_score: 359
  • Evalue 3.20e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1074
ATGCCTGAATCCGCTCCAAACCGCCGAGATTTCTTGACCGGACGCGCTATCCGAGATGCGGCGGAACGAGCGGGCGAACAGCTTGCCGAGGATTTGACGTCGGTCCCTGCTCCGTCGCGGGGACCGACGCTGATGCTGCGGACAACGGCCATGGCGTGCGACTTTGACGTCATACTCAACCCCAGCAGTTCCGGAGACCAACTCGACGCAGCTTCGTGCGCGCTGGATCTGGTTCATGAACTGGAACAACAGCTTTCTGTCTATCGTACGGACAGCACGCTCAGCGAGTTAAACCGGCGCGCAGCCCAAGAGCCCGTGCATGTTGAGCAAGAACTCTATTCGTTGCTTTCAAAGGGCCGCGTCCTTTGCGAACGGACCGAACTGGCTTTCGACCCACTGTCCGGTGCTCTGATCGACCTCTGGCGCCGTTGCCGGCAGGAATTTCGGATCCCCACAGAAGACGAACTTTCCATCACACTGCCGTTGTGCGGCGTGACGAAAGTTCAGTTTGACGACACAAATCAGACGATTGCGTTCCCACGCGAAGGAATGGCGTTCAATCTGGGTGCGATTGGGAAAGGTTACGCTGTCGATCAGGCGGGGCTTCGGCTTGTTGAAGGCGGCGTAACAAATTGGCTCGCCCATGGTGGAAGGAGTAGCATCCGCGCGCAAGGAACTCATGCCGGCCACGACGGTTGGCCGATTGGACTGAGGAATCCGCTGCTACCCGACAAAGCATTCGCTACGTTACTACTCAAAGACGGCGCGATCGGTACAAGCGGCACAGCCGTACAATGGTTCCGACACGAAGGGAAACGTTACGGACATATCCTTGATCCCCGCACAGGCTGGCCGGTCGAAACCCTGCTTTCTGTCAGCGTGGTTGCACCGGAAGCAGCCATAGCCGATGCGCTTTCTACCGCTTTTTTCGTGTTGGGAGTCGAAAAGAGTCTGGAATGTTGTGATAATCTGCCGGATTCCGTGGGCGCGATCTTTTTTCCGTTGCCCAAGCAGGGTCAGACATTAGAGCCGATCCTGCATAACATGCCTCGCGAGAGGTGGTTTGCGACCTGA
PROTEIN sequence
Length: 358
MPESAPNRRDFLTGRAIRDAAERAGEQLAEDLTSVPAPSRGPTLMLRTTAMACDFDVILNPSSSGDQLDAASCALDLVHELEQQLSVYRTDSTLSELNRRAAQEPVHVEQELYSLLSKGRVLCERTELAFDPLSGALIDLWRRCRQEFRIPTEDELSITLPLCGVTKVQFDDTNQTIAFPREGMAFNLGAIGKGYAVDQAGLRLVEGGVTNWLAHGGRSSIRAQGTHAGHDGWPIGLRNPLLPDKAFATLLLKDGAIGTSGTAVQWFRHEGKRYGHILDPRTGWPVETLLSVSVVAPEAAIADALSTAFFVLGVEKSLECCDNLPDSVGAIFFPLPKQGQTLEPILHNMPRERWFAT*