ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_122931_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 3..626

Top 3 Functional Annotations

Value Algorithm Source
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 208.0
  • Bit_score: 292
  • Evalue 2.80e-76
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Schlesneria paludicola RepID=UPI000299DCA5 similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 207.0
  • Bit_score: 385
  • Evalue 2.20e-104
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 207.0
  • Bit_score: 280
  • Evalue 3.70e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 624
CGCTGGGAAGCGGAAGGGGCCACGCGACTACACCTCGTCGATCTCGATGGAGCGAAAGCGGGCAAGCCAGTCAATGTGGCGGCCATTCAATCGATCATTAATGCGATTAAGATCCCCTGCGAACTCGGTGGAGGATTGAGAGATGCTGATTCGATTCGGACGATGCTTGACCTTGGCATTGATCGGGCCATCATCGGAACACAGGCTCTGAAACAACCCGACTGGTTCCGAGACATGGCCCAGACGTTCCCCGGTCATATTGCCTTGGGGCTCGACGCTCGAAACGGAATGGTGGCGACCGCAGGTTGGTTGGATGTCTCACAGACCAAAGCGATCGAACTCGCGCGTCAATTCGTTGGCCTCAATCTCGCCGCAGTGATCTATACCAACATCGCCAACGATGGAATGATGCAGGGTGTCGACGAGGGGACAATTCAGGACATGCTGGACTTGGCAGCACTCGGACTACCGGTGATCGCATCCGGCGGCGTCAGCACGCTGGCGGATGTCGAACGCCTGACCGCGGTCTCAAGAACGCAACCGAAACTGATCGGGGCAATTGTGGGTCGCGCCATCTACGAGGGCACGATCCGCGTCGCAGATGCCGTTCGGATTGCGGGATAG
PROTEIN sequence
Length: 208
RWEAEGATRLHLVDLDGAKAGKPVNVAAIQSIINAIKIPCELGGGLRDADSIRTMLDLGIDRAIIGTQALKQPDWFRDMAQTFPGHIALGLDARNGMVATAGWLDVSQTKAIELARQFVGLNLAAVIYTNIANDGMMQGVDEGTIQDMLDLAALGLPVIASGGVSTLADVERLTAVSRTQPKLIGAIVGRAIYEGTIRVADAVRIAG*