ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_132963_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(868..1596)

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Schlesneria paludicola RepID=UPI00029AB3C0 similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 242.0
  • Bit_score: 450
  • Evalue 8.60e-124
hydrophobe/amphiphile efflux-1 (HAE1) family transporter similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 250.0
  • Bit_score: 352
  • Evalue 6.90e-95
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:AGA31244.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 250.0
  • Bit_score: 352
  • Evalue 3.40e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 729
ATCAACGGTCAGGCAGCCCCAGGATTTAGCTCGGGTGACGCCATGGCATTGATGGAACAAATGGCAAAACAGAAATTGCCCACTTCGATGGGCTATGACTGGACGGGGATTTCCTACCAGGAAAAGAAAGTCGGCGGACAAGCCGTCTATGTGTTCGCCCTGGCCGTGTTGATGGTGTACCTGGTTTTGGCCGCACAGTACGAGAGCTGGCTGTTGCCGGCCGCTGTGATTCTCGTGGTGCCTTTGGCGCTGCTTGGTACCGTGGCGGCAGTGGCAATCCGCGGCATGGACAACAACGTCTACACGCAGATCGGGATCGTGTTGATTATCGCCCTGGCGAGTAAGAACGCGATTTTGATCGTCGAGTTTGCACGCGAGCTGCGTCATAAGGGAATGGGCATTCTTGAAGCGTCGGTCGAGGCGTCACGATTGCGGTTCCGGCCAATTTTGATGACATCCTTCGCGTTCATCCTGGGGATCCTGCCGCTCGTGAATGCAACGGGTGCCGGTGCTGCCAGCCGAAGATCACTTGGAACGGCCGTATTCGGCGGGATGCTCGCAGCGACGGTACTCGCGGTGTTCTTCGTGCCCGTGTTCTACGTCGTTATGCAACGCCTGAGTGAACTGCGACGACGACCGCAGGCTGCTGGCCACCCTGCCGCCGAACAACCCACGAAAGAGGGTGGGCACGGCATCGAGATGGCCGCCACGGCGCTCGTTCAGCACTAA
PROTEIN sequence
Length: 243
INGQAAPGFSSGDAMALMEQMAKQKLPTSMGYDWTGISYQEKKVGGQAVYVFALAVLMVYLVLAAQYESWLLPAAVILVVPLALLGTVAAVAIRGMDNNVYTQIGIVLIIALASKNAILIVEFARELRHKGMGILEASVEASRLRFRPILMTSFAFILGILPLVNATGAGAASRRSLGTAVFGGMLAATVLAVFFVPVFYVVMQRLSELRRRPQAAGHPAAEQPTKEGGHGIEMAATALVQH*