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2019_SCN_bioreactor_t3_planktonic_scaffold_119535_7

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(4644..5360)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Schlesneria paludicola RepID=UPI00029A7EFA similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 201.0
  • Bit_score: 384
  • Evalue 7.40e-104
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 182.0
  • Bit_score: 260
  • Evalue 2.30e-66
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 201.0
  • Bit_score: 235
  • Evalue 1.60e-59

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Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 717
ATGGACAATTTTTCTGAAGTTCCCCAACATCTTTCAGAGGGACGACGTAAGTGTTTTACGGGTGCCCCAATGCAGAACATTATGACACGATCGCTGAGCGGACTAACAGGTGTCGACGAAACGACGGCCGCGACGCATGAGTCACGGCTGGTTGAAGATGCGCGCCGAGGCTGTCAAATGGCCTTTGGCGAACTGGTGACGCGATATGAACGCCGCCTGATTCGCGTGATTCTTCAATTTGTGAAAAGTCAGGAATTGGCCGAGGATCTGGCGCAGGAAGCCTTTCTGAAGGCATACCAGAGACTTGGTCAGTTTGATGCGTCTCGTCGGTTCGGTCCGTGGCTATTTCGAATTGGCGTCAACCAGACGCTCGATTATTTGCGTCGTCGCAAGCGACGCGGTTGGTGGATGCTGTTTTCTGAGCGGGGAACGGAACGGGATCCAGATCCCGCGGTGGCTGATCCACGTCAGCAACTGGATCTTGAGCAAGAGGTCGCTGCCGTCTTGGAGCAAATTCCCGAGAACTATCGCGTTGTCTTGATATTGCGTGAGCTGCAGAATTTCTCGACATGCGATATTGCTGCCATTCTGGAGCGAAAAGAAGCGACTGTTCGCTGGAGGCTGGCAGAGGCCCGATCGATGTTTCACGATTTGTGGGTGAAACGGCGCGATGGTGCTGCGGGCGTGGCATGCCCGATTTCGATGGATGGAGTTTGA
PROTEIN sequence
Length: 239
MDNFSEVPQHLSEGRRKCFTGAPMQNIMTRSLSGLTGVDETTAATHESRLVEDARRGCQMAFGELVTRYERRLIRVILQFVKSQELAEDLAQEAFLKAYQRLGQFDASRRFGPWLFRIGVNQTLDYLRRRKRRGWWMLFSERGTERDPDPAVADPRQQLDLEQEVAAVLEQIPENYRVVLILRELQNFSTCDIAAILERKEATVRWRLAEARSMFHDLWVKRRDGAAGVACPISMDGV*