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RBG_16_DPX2_64_85_RBG_16_scaffold_4178_19

Organism: Deltaproteobacteria bacterium RBG_16_64_85

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(13617..14207)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Deltaproteobacteria_64_85_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 388
  • Evalue 7.80e-105
RNA polymerase sigma-54 factor RpoN id=4881915 bin=GWC2_Proteo_65_14_Ab886 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 197.0
  • Bit_score: 285
  • Evalue 3.90e-74
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 193.0
  • Bit_score: 160
  • Evalue 5.30e-37

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Taxonomy

RBG_16_Deltaproteobacteria_64_85_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
GTGGATTCGAACGGTGGAAGCCCCAGGCCGGTGGATTTGTTGCTGCAGGCGTTCCGGCAGGGGAAGCCGGGGGCGTTCGACGCCATCGTCCTCGCCCACCAGGACCGGGTGTACGCATTCTGCTCCCGGATGCTCTCCGACCGGGAGGAGGCCCTGGATATCGCCCAGGAGGTATTTCTCTCGGCCTACCGGAACCTCGGCGGGTTCCGGGAAGAGGCGGCGCTGGCCACGTGGCTGCTCAGGATTGCGGCCAACCGGTGCCTGAACCGGATCCGGCAGAGATCCTCCCTCGCGGCGCGGGAGGTCGTCTTCCCGGATGGGGCGGAGCGGGACTACCCGCTCTTCCAGCCGCCGGCCCCCGAGGAGGGGCGGCCGGACCGGATCGCCGAAAACCGGGAGATGGCGAAGATCCTGGAAAGGGCGCTCGGCCGCATCGATCCCGACTCGCGATGGCTGCTGCTCCTTTCGGACGTCGAAGGGTTTACGTACGAGGAAATCGCCGCCATGGCGGGGATCCCGGTCGGCACGGTGAAATCGAGACTTCACAGGGCGCGGATGGCGTTGAGGAAAATCCTCGCGCCGGTGGTTTGA
PROTEIN sequence
Length: 197
VDSNGGSPRPVDLLLQAFRQGKPGAFDAIVLAHQDRVYAFCSRMLSDREEALDIAQEVFLSAYRNLGGFREEAALATWLLRIAANRCLNRIRQRSSLAAREVVFPDGAERDYPLFQPPAPEEGRPDRIAENREMAKILERALGRIDPDSRWLLLLSDVEGFTYEEIAAMAGIPVGTVKSRLHRARMALRKILAPVV*